Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC13.96□□□□□ -0.17
Col9a1Q05722 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.96□□□□□ -0.17
Col9a1Q05722 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.96□□□□□ -0.17
Col9a1Q05722 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Col9a1Q05722 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a1Q05722 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a1Q05722 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a1Q05722 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a1Q05722 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a1Q05722 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a1Q05722 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Col9a1Q05722 Gm9440-201ENSMUST00000119667 539 ntBASIC13.96□□□□□ -0.17
Col9a1Q05722 Gm13297-201ENSMUST00000120205 934 ntBASIC13.96□□□□□ -0.17
Col9a1Q05722 Gm9083-201ENSMUST00000120423 819 ntBASIC13.96□□□□□ -0.17
Col9a1Q05722 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.96□□□□□ -0.17
Col9a1Q05722 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a1Q05722 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a1Q05722 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.96□□□□□ -0.17
Col9a1Q05722 Gm17889-201ENSMUST00000198410 598 ntBASIC13.96□□□□□ -0.17
Col9a1Q05722 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.96□□□□□ -0.17
Col9a1Q05722 Gm18584-201ENSMUST00000203098 964 ntBASIC13.96□□□□□ -0.17
Col9a1Q05722 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a1Q05722 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a1Q05722 Gm21769-201ENSMUST00000211922 111 ntBASIC13.96□□□□□ -0.17
Col9a1Q05722 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a1Q05722 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.96□□□□□ -0.17
Col9a1Q05722 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a1Q05722 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a1Q05722 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a1Q05722 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Col9a1Q05722 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a1Q05722 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Col9a1Q05722 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Col9a1Q05722 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col9a1Q05722 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
Col9a1Q05722 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col9a1Q05722 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col9a1Q05722 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col9a1Q05722 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col9a1Q05722 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col9a1Q05722 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col9a1Q05722 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a1Q05722 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a1Q05722 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a1Q05722 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a1Q05722 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a1Q05722 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a1Q05722 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a1Q05722 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.95□□□□□ -0.18
Col9a1Q05722 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a1Q05722 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a1Q05722 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a1Q05722 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a1Q05722 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a1Q05722 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a1Q05722 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a1Q05722 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.95□□□□□ -0.18
Col9a1Q05722 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a1Q05722 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a1Q05722 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.95□□□□□ -0.18
Col9a1Q05722 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Col9a1Q05722 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Col9a1Q05722 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.95□□□□□ -0.18
Col9a1Q05722 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.95□□□□□ -0.18
Col9a1Q05722 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC13.95□□□□□ -0.18
Col9a1Q05722 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.95□□□□□ -0.18
Col9a1Q05722 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Col9a1Q05722 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Col9a1Q05722 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Col9a1Q05722 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a1Q05722 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.95□□□□□ -0.18
Col9a1Q05722 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a1Q05722 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a1Q05722 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a1Q05722 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Col9a1Q05722 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Col9a1Q05722 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a1Q05722 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a1Q05722 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a1Q05722 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a1Q05722 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.95□□□□□ -0.18
Col9a1Q05722 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a1Q05722 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.95□□□□□ -0.18
Col9a1Q05722 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.94□□□□□ -0.18
Col9a1Q05722 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a1Q05722 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC13.94□□□□□ -0.18
Col9a1Q05722 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a1Q05722 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC13.94□□□□□ -0.18
Col9a1Q05722 4833412K13Rik-201ENSMUST00000195509 1479 ntBASIC13.94□□□□□ -0.18
Col9a1Q05722 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a1Q05722 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a1Q05722 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a1Q05722 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a1Q05722 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a1Q05722 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a1Q05722 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a1Q05722 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.94□□□□□ -0.18
Col9a1Q05722 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.94□□□□□ -0.18
Col9a1Q05722 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.94□□□□□ -0.18
Col9a1Q05722 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms