Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
SgcbP82349 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SgcbP82349 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SgcbP82349 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.75□□□□□ -0.37
SgcbP82349 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcbP82349 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SgcbP82349 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
SgcbP82349 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcbP82349 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SgcbP82349 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SgcbP82349 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SgcbP82349 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SgcbP82349 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcbP82349 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcbP82349 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcbP82349 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
SgcbP82349 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcbP82349 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcbP82349 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcbP82349 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SgcbP82349 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SgcbP82349 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcbP82349 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.74□□□□□ -0.37
SgcbP82349 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.74□□□□□ -0.37
SgcbP82349 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SgcbP82349 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.74□□□□□ -0.37
SgcbP82349 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SgcbP82349 Gm25144-201ENSMUST00000179561 110 ntBASIC12.74□□□□□ -0.37
SgcbP82349 Gm25352-201ENSMUST00000179815 110 ntBASIC12.74□□□□□ -0.37
SgcbP82349 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SgcbP82349 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SgcbP82349 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.74□□□□□ -0.37
SgcbP82349 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SgcbP82349 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcbP82349 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcbP82349 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SgcbP82349 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcbP82349 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SgcbP82349 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcbP82349 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcbP82349 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SgcbP82349 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcbP82349 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.74□□□□□ -0.37
SgcbP82349 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcbP82349 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcbP82349 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SgcbP82349 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcbP82349 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.74□□□□□ -0.37
SgcbP82349 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
SgcbP82349 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
SgcbP82349 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.73□□□□□ -0.37
SgcbP82349 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
SgcbP82349 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.73□□□□□ -0.37
SgcbP82349 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.73□□□□□ -0.37
SgcbP82349 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.73□□□□□ -0.37
SgcbP82349 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SgcbP82349 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SgcbP82349 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SgcbP82349 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 Gm24543-201ENSMUST00000103867 82 ntBASIC12.73□□□□□ -0.37
SgcbP82349 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
SgcbP82349 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.73□□□□□ -0.37
SgcbP82349 Gm10275-202ENSMUST00000168697 495 ntBASIC12.73□□□□□ -0.37
SgcbP82349 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.73□□□□□ -0.37
SgcbP82349 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
SgcbP82349 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 Gm10275-201ENSMUST00000092620 635 ntBASIC12.73□□□□□ -0.37
SgcbP82349 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
SgcbP82349 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SgcbP82349 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
SgcbP82349 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.73□□□□□ -0.37
SgcbP82349 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
SgcbP82349 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcbP82349 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms