Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim4P70271 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pdlim4P70271 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim4P70271 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim4P70271 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim4P70271 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim4P70271 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.91□□□□□ -0.5
Pdlim4P70271 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim4P70271 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Pdlim4P70271 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim4P70271 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.91□□□□□ -0.5
Pdlim4P70271 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pdlim4P70271 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim4P70271 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim4P70271 Gm14701-201ENSMUST00000117156 348 ntBASIC11.91□□□□□ -0.5
Pdlim4P70271 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim4P70271 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.91□□□□□ -0.5
Pdlim4P70271 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.91□□□□□ -0.5
Pdlim4P70271 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim4P70271 Gm43474-201ENSMUST00000196415 774 ntBASIC11.91□□□□□ -0.5
Pdlim4P70271 Olfr286-202ENSMUST00000205305 969 ntBASIC11.91□□□□□ -0.5
Pdlim4P70271 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC11.91□□□□□ -0.5
Pdlim4P70271 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.91□□□□□ -0.5
Pdlim4P70271 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim4P70271 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim4P70271 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim4P70271 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim4P70271 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim4P70271 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim4P70271 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.91□□□□□ -0.5
Pdlim4P70271 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim4P70271 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pdlim4P70271 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim4P70271 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim4P70271 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim4P70271 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim4P70271 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim4P70271 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim4P70271 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim4P70271 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim4P70271 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim4P70271 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim4P70271 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pdlim4P70271 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim4P70271 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim4P70271 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim4P70271 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim4P70271 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim4P70271 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
Pdlim4P70271 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim4P70271 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Pdlim4P70271 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim4P70271 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim4P70271 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim4P70271 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim4P70271 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pdlim4P70271 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.9□□□□□ -0.5
Pdlim4P70271 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pdlim4P70271 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Pdlim4P70271 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.9□□□□□ -0.5
Pdlim4P70271 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.9□□□□□ -0.5
Pdlim4P70271 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.9□□□□□ -0.5
Pdlim4P70271 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.9□□□□□ -0.5
Pdlim4P70271 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.9□□□□□ -0.5
Pdlim4P70271 Gm24158-201ENSMUST00000175263 71 ntBASIC11.9□□□□□ -0.5
Pdlim4P70271 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim4P70271 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.9□□□□□ -0.5
Pdlim4P70271 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim4P70271 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Pdlim4P70271 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim4P70271 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim4P70271 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.9□□□□□ -0.5
Pdlim4P70271 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.9□□□□□ -0.5
Pdlim4P70271 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim4P70271 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim4P70271 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim4P70271 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim4P70271 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim4P70271 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pdlim4P70271 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Pdlim4P70271 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.51
Pdlim4P70271 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Pdlim4P70271 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.89□□□□□ -0.51
Pdlim4P70271 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Pdlim4P70271 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.89□□□□□ -0.51
Pdlim4P70271 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pdlim4P70271 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.89□□□□□ -0.51
Pdlim4P70271 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.89□□□□□ -0.51
Pdlim4P70271 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.89□□□□□ -0.51
Pdlim4P70271 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.89□□□□□ -0.51
Pdlim4P70271 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms