Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup43P59235 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nup43P59235 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup43P59235 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup43P59235 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup43P59235 Gm12882-201ENSMUST00000121696 517 ntBASIC13.49□□□□□ -0.25
Nup43P59235 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.49□□□□□ -0.25
Nup43P59235 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup43P59235 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.49□□□□□ -0.25
Nup43P59235 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Nup43P59235 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nup43P59235 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nup43P59235 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nup43P59235 Gm45453-201ENSMUST00000211758 853 ntBASIC13.49□□□□□ -0.25
Nup43P59235 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.49□□□□□ -0.25
Nup43P59235 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup43P59235 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.49□□□□□ -0.25
Nup43P59235 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup43P59235 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Nup43P59235 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nup43P59235 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup43P59235 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Nup43P59235 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup43P59235 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup43P59235 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup43P59235 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup43P59235 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Nup43P59235 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup43P59235 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nup43P59235 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.49□□□□□ -0.25
Nup43P59235 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup43P59235 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Nup43P59235 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup43P59235 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup43P59235 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Nup43P59235 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup43P59235 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nup43P59235 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup43P59235 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup43P59235 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup43P59235 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.48□□□□□ -0.25
Nup43P59235 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup43P59235 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup43P59235 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.48□□□□□ -0.25
Nup43P59235 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Nup43P59235 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Nup43P59235 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nup43P59235 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup43P59235 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup43P59235 Gm27622-201ENSMUST00000183779 60 ntBASIC13.48□□□□□ -0.25
Nup43P59235 Gm28630-201ENSMUST00000187806 498 ntBASIC13.48□□□□□ -0.25
Nup43P59235 AA619741-201ENSMUST00000195095 646 ntBASIC13.48□□□□□ -0.25
Nup43P59235 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.48□□□□□ -0.25
Nup43P59235 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Nup43P59235 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.48□□□□□ -0.25
Nup43P59235 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Nup43P59235 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.48□□□□□ -0.25
Nup43P59235 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup43P59235 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup43P59235 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup43P59235 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup43P59235 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup43P59235 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup43P59235 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup43P59235 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup43P59235 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Nup43P59235 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Nup43P59235 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.48□□□□□ -0.25
Nup43P59235 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup43P59235 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup43P59235 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup43P59235 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.48□□□□□ -0.25
Nup43P59235 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Nup43P59235 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nup43P59235 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup43P59235 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup43P59235 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup43P59235 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nup43P59235 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup43P59235 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup43P59235 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup43P59235 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup43P59235 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup43P59235 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup43P59235 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup43P59235 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup43P59235 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.47□□□□□ -0.25
Nup43P59235 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Nup43P59235 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Nup43P59235 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup43P59235 Gm24543-201ENSMUST00000103867 82 ntBASIC13.47□□□□□ -0.25
Nup43P59235 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nup43P59235 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nup43P59235 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.47□□□□□ -0.25
Nup43P59235 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Nup43P59235 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup43P59235 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup43P59235 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup43P59235 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nup43P59235 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms