Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ercc3P49135 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Ercc3P49135 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ercc3P49135 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc3P49135 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc3P49135 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc3P49135 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ercc3P49135 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc3P49135 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.95■□□□□ 0.3
Ercc3P49135 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc3P49135 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.95■□□□□ 0.3
Ercc3P49135 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc3P49135 Gm6539-201ENSMUST00000119157 1064 ntBASIC16.95■□□□□ 0.3
Ercc3P49135 Gm6222-201ENSMUST00000120787 396 ntBASIC16.95■□□□□ 0.3
Ercc3P49135 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.95■□□□□ 0.3
Ercc3P49135 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc3P49135 Gm9719-201ENSMUST00000162765 543 ntBASIC16.95■□□□□ 0.3
Ercc3P49135 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.95■□□□□ 0.3
Ercc3P49135 Gm27622-201ENSMUST00000183779 60 ntBASIC16.95■□□□□ 0.3
Ercc3P49135 Gm27631-201ENSMUST00000184163 466 ntBASIC16.95■□□□□ 0.3
Ercc3P49135 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.95■□□□□ 0.3
Ercc3P49135 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc3P49135 Gm6888-201ENSMUST00000221983 706 ntBASIC16.95■□□□□ 0.3
Ercc3P49135 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc3P49135 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.95■□□□□ 0.3
Ercc3P49135 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc3P49135 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc3P49135 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.95■□□□□ 0.3
Ercc3P49135 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc3P49135 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc3P49135 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Ercc3P49135 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.95■□□□□ 0.3
Ercc3P49135 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc3P49135 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc3P49135 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ercc3P49135 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ercc3P49135 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc3P49135 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc3P49135 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc3P49135 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc3P49135 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc3P49135 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc3P49135 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc3P49135 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc3P49135 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc3P49135 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc3P49135 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc3P49135 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.94■□□□□ 0.3
Ercc3P49135 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc3P49135 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc3P49135 Gm27430-201ENSMUST00000184585 107 ntBASIC16.94■□□□□ 0.3
Ercc3P49135 Gm44333-201ENSMUST00000197168 107 ntBASIC16.94■□□□□ 0.3
Ercc3P49135 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.94■□□□□ 0.3
Ercc3P49135 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.94■□□□□ 0.3
Ercc3P49135 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc3P49135 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc3P49135 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc3P49135 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc3P49135 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc3P49135 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc3P49135 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc3P49135 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc3P49135 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc3P49135 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc3P49135 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ercc3P49135 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc3P49135 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc3P49135 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc3P49135 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc3P49135 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc3P49135 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ercc3P49135 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc3P49135 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc3P49135 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc3P49135 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc3P49135 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.93■□□□□ 0.3
Ercc3P49135 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc3P49135 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc3P49135 Mir1897-201ENSMUST00000122581 272 ntBASIC16.93■□□□□ 0.3
Ercc3P49135 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc3P49135 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Ercc3P49135 Auts2-212ENSMUST00000178555 309 ntBASIC16.93■□□□□ 0.3
Ercc3P49135 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc3P49135 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.93■□□□□ 0.3
Ercc3P49135 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc3P49135 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc3P49135 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc3P49135 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc3P49135 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc3P49135 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.93■□□□□ 0.3
Ercc3P49135 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc3P49135 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc3P49135 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc3P49135 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ercc3P49135 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ercc3P49135 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ercc3P49135 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ercc3P49135 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ercc3P49135 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.92■□□□□ 0.3
Ercc3P49135 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms