Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx2P48379 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.99□□□□□ -0.01
Rfx2P48379 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx2P48379 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx2P48379 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx2P48379 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Rfx2P48379 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx2P48379 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx2P48379 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.98□□□□□ -0.01
Rfx2P48379 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx2P48379 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx2P48379 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx2P48379 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx2P48379 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Rfx2P48379 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx2P48379 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.98□□□□□ -0.01
Rfx2P48379 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx2P48379 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.98□□□□□ -0.01
Rfx2P48379 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx2P48379 Gm5866-201ENSMUST00000177881 973 ntBASIC14.98□□□□□ -0.01
Rfx2P48379 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.98□□□□□ -0.01
Rfx2P48379 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.98□□□□□ -0.01
Rfx2P48379 Gm9182-201ENSMUST00000217829 639 ntBASIC14.98□□□□□ -0.01
Rfx2P48379 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx2P48379 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx2P48379 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx2P48379 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Rfx2P48379 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Rfx2P48379 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx2P48379 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.98□□□□□ -0.01
Rfx2P48379 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Rfx2P48379 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.98□□□□□ -0.01
Rfx2P48379 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx2P48379 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx2P48379 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx2P48379 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx2P48379 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx2P48379 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx2P48379 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx2P48379 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx2P48379 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Rfx2P48379 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx2P48379 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx2P48379 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx2P48379 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Rfx2P48379 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx2P48379 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Rfx2P48379 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx2P48379 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx2P48379 Gm24543-201ENSMUST00000103867 82 ntBASIC14.97□□□□□ -0.01
Rfx2P48379 Gm27533-201ENSMUST00000183800 152 ntBASIC14.97□□□□□ -0.01
Rfx2P48379 Gm27680-201ENSMUST00000184192 160 ntBASIC14.97□□□□□ -0.01
Rfx2P48379 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Rfx2P48379 Gm44344-201ENSMUST00000200287 129 ntBASIC14.97□□□□□ -0.01
Rfx2P48379 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx2P48379 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Rfx2P48379 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx2P48379 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.97□□□□□ -0.01
Rfx2P48379 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx2P48379 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
Rfx2P48379 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx2P48379 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx2P48379 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Rfx2P48379 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx2P48379 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx2P48379 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx2P48379 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx2P48379 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.96□□□□□ -0.01
Rfx2P48379 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx2P48379 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Rfx2P48379 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx2P48379 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx2P48379 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx2P48379 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Rfx2P48379 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.96□□□□□ -0.01
Rfx2P48379 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Rfx2P48379 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.96□□□□□ -0.01
Rfx2P48379 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx2P48379 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx2P48379 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx2P48379 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx2P48379 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx2P48379 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx2P48379 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Rfx2P48379 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx2P48379 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx2P48379 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Rfx2P48379 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx2P48379 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx2P48379 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.96□□□□□ -0.01
Rfx2P48379 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Rfx2P48379 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.02
Rfx2P48379 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rfx2P48379 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Rfx2P48379 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rfx2P48379 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rfx2P48379 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx2P48379 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rfx2P48379 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx2P48379 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms