Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.51□□□□□ -0.25
Cdx2P43241 Gm43094-201ENSMUST00000196549 921 ntBASIC13.51□□□□□ -0.25
Cdx2P43241 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx2P43241 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx2P43241 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx2P43241 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.51□□□□□ -0.25
Cdx2P43241 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.51□□□□□ -0.25
Cdx2P43241 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Cdx2P43241 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx2P43241 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx2P43241 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx2P43241 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cdx2P43241 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx2P43241 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx2P43241 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx2P43241 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx2P43241 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx2P43241 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cdx2P43241 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx2P43241 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx2P43241 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx2P43241 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx2P43241 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx2P43241 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Cdx2P43241 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx2P43241 Gm13226-201ENSMUST00000117838 404 ntBASIC13.5□□□□□ -0.25
Cdx2P43241 Gm15429-201ENSMUST00000151268 798 ntBASIC13.5□□□□□ -0.25
Cdx2P43241 Gm19078-201ENSMUST00000206311 727 ntBASIC13.5□□□□□ -0.25
Cdx2P43241 Gm8463-201ENSMUST00000208573 613 ntBASIC13.5□□□□□ -0.25
Cdx2P43241 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.5□□□□□ -0.25
Cdx2P43241 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx2P43241 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx2P43241 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cdx2P43241 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx2P43241 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cdx2P43241 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx2P43241 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx2P43241 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx2P43241 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx2P43241 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.5□□□□□ -0.25
Cdx2P43241 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cdx2P43241 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx2P43241 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.5□□□□□ -0.25
Cdx2P43241 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx2P43241 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cdx2P43241 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Cdx2P43241 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.49□□□□□ -0.25
Cdx2P43241 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cdx2P43241 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.49□□□□□ -0.25
Cdx2P43241 Gm44608-201ENSMUST00000206827 855 ntBASIC13.49□□□□□ -0.25
Cdx2P43241 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.49□□□□□ -0.25
Cdx2P43241 Gm18027-201ENSMUST00000218947 619 ntBASIC13.49□□□□□ -0.25
Cdx2P43241 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.49□□□□□ -0.25
Cdx2P43241 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.49□□□□□ -0.25
Cdx2P43241 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.49□□□□□ -0.25
Cdx2P43241 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.49□□□□□ -0.25
Cdx2P43241 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.49□□□□□ -0.25
Cdx2P43241 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.49□□□□□ -0.25
Cdx2P43241 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx2P43241 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx2P43241 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx2P43241 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx2P43241 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx2P43241 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx2P43241 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx2P43241 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx2P43241 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx2P43241 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.48□□□□□ -0.25
Cdx2P43241 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms