Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HttP42859 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
HttP42859 Gm14208-201ENSMUST00000119645 678 ntBASIC14.88□□□□□ -0.03
HttP42859 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.88□□□□□ -0.03
HttP42859 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HttP42859 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HttP42859 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HttP42859 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
HttP42859 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HttP42859 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.88□□□□□ -0.03
HttP42859 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HttP42859 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HttP42859 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HttP42859 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.88□□□□□ -0.03
HttP42859 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HttP42859 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
HttP42859 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HttP42859 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HttP42859 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HttP42859 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
HttP42859 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HttP42859 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HttP42859 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
HttP42859 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HttP42859 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HttP42859 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HttP42859 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HttP42859 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.87□□□□□ -0.03
HttP42859 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HttP42859 Gm24548-201ENSMUST00000158650 108 ntBASIC14.87□□□□□ -0.03
HttP42859 Gm44100-201ENSMUST00000204329 436 ntBASIC14.87□□□□□ -0.03
HttP42859 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.87□□□□□ -0.03
HttP42859 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HttP42859 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HttP42859 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HttP42859 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HttP42859 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HttP42859 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.87□□□□□ -0.03
HttP42859 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HttP42859 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HttP42859 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HttP42859 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.87□□□□□ -0.03
HttP42859 Gm3508-201ENSMUST00000186012 792 ntBASIC14.87□□□□□ -0.03
HttP42859 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HttP42859 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HttP42859 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HttP42859 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HttP42859 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
HttP42859 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HttP42859 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HttP42859 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HttP42859 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.86□□□□□ -0.03
HttP42859 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HttP42859 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HttP42859 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.86□□□□□ -0.03
HttP42859 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HttP42859 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HttP42859 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HttP42859 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HttP42859 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HttP42859 Gm44551-201ENSMUST00000208804 171 ntBASIC14.86□□□□□ -0.03
HttP42859 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HttP42859 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HttP42859 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HttP42859 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HttP42859 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HttP42859 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14.86□□□□□ -0.03
HttP42859 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.86□□□□□ -0.03
HttP42859 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HttP42859 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HttP42859 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HttP42859 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
HttP42859 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.85□□□□□ -0.03
HttP42859 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HttP42859 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HttP42859 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HttP42859 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.85□□□□□ -0.03
HttP42859 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HttP42859 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HttP42859 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HttP42859 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HttP42859 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HttP42859 Gm27023-201ENSMUST00000182372 285 ntBASIC14.85□□□□□ -0.03
HttP42859 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.85□□□□□ -0.03
HttP42859 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HttP42859 Gm10146-201ENSMUST00000072739 309 ntBASIC14.85□□□□□ -0.03
HttP42859 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HttP42859 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HttP42859 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
HttP42859 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HttP42859 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.85□□□□□ -0.03
HttP42859 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HttP42859 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.85□□□□□ -0.03
HttP42859 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
HttP42859 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
HttP42859 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HttP42859 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
HttP42859 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HttP42859 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HttP42859 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms