Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.43□□□□□ -0.26
Sox6P40645 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Sox6P40645 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox6P40645 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.43□□□□□ -0.26
Sox6P40645 Gm43767-201ENSMUST00000198933 381 ntBASIC13.43□□□□□ -0.26
Sox6P40645 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox6P40645 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox6P40645 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox6P40645 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox6P40645 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox6P40645 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox6P40645 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox6P40645 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Sox6P40645 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Sox6P40645 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox6P40645 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Sox6P40645 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox6P40645 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.43□□□□□ -0.26
Sox6P40645 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Sox6P40645 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox6P40645 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Sox6P40645 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox6P40645 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox6P40645 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox6P40645 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.42□□□□□ -0.26
Sox6P40645 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox6P40645 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Sox6P40645 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox6P40645 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox6P40645 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox6P40645 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox6P40645 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox6P40645 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox6P40645 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox6P40645 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Sox6P40645 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Sox6P40645 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Sox6P40645 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox6P40645 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox6P40645 Mir8117-201ENSMUST00000184773 107 ntBASIC13.42□□□□□ -0.26
Sox6P40645 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.42□□□□□ -0.26
Sox6P40645 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.42□□□□□ -0.26
Sox6P40645 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox6P40645 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.42□□□□□ -0.26
Sox6P40645 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox6P40645 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox6P40645 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox6P40645 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox6P40645 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox6P40645 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Sox6P40645 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sox6P40645 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox6P40645 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox6P40645 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox6P40645 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox6P40645 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.41□□□□□ -0.26
Sox6P40645 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.41□□□□□ -0.26
Sox6P40645 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox6P40645 Gm11779-201ENSMUST00000118541 368 ntBASIC13.41□□□□□ -0.26
Sox6P40645 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox6P40645 Gm13597-201ENSMUST00000121239 375 ntBASIC13.41□□□□□ -0.26
Sox6P40645 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.41□□□□□ -0.26
Sox6P40645 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.41□□□□□ -0.26
Sox6P40645 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.41□□□□□ -0.26
Sox6P40645 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox6P40645 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sox6P40645 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox6P40645 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox6P40645 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox6P40645 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sox6P40645 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sox6P40645 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox6P40645 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox6P40645 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox6P40645 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox6P40645 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Sox6P40645 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.41□□□□□ -0.26
Sox6P40645 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox6P40645 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Sox6P40645 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox6P40645 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox6P40645 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Sox6P40645 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox6P40645 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox6P40645 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sox6P40645 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.4□□□□□ -0.26
Sox6P40645 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox6P40645 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox6P40645 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox6P40645 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox6P40645 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Sox6P40645 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox6P40645 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sox6P40645 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox6P40645 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox6P40645 Mir3113-201ENSMUST00000175478 76 ntBASIC13.4□□□□□ -0.26
Sox6P40645 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sox6P40645 Gm27525-201ENSMUST00000184465 107 ntBASIC13.4□□□□□ -0.26
Sox6P40645 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.4□□□□□ -0.26
Sox6P40645 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms