Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd1P40201 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd1P40201 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Chd1P40201 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd1P40201 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Chd1P40201 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Chd1P40201 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd1P40201 Mir698-201ENSMUST00000102164 109 ntBASIC21.07■□□□□ 0.96
Chd1P40201 Gm11637-201ENSMUST00000120601 592 ntBASIC21.07■□□□□ 0.96
Chd1P40201 Gm13570-201ENSMUST00000140763 309 ntBASIC21.07■□□□□ 0.96
Chd1P40201 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Chd1P40201 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC21.07■□□□□ 0.96
Chd1P40201 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC21.07■□□□□ 0.96
Chd1P40201 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC21.06■□□□□ 0.96
Chd1P40201 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd1P40201 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
Chd1P40201 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd1P40201 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd1P40201 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd1P40201 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd1P40201 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd1P40201 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Chd1P40201 Gm16202-201ENSMUST00000117532 544 ntBASIC21.06■□□□□ 0.96
Chd1P40201 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC21.06■□□□□ 0.96
Chd1P40201 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Chd1P40201 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC21.06■□□□□ 0.96
Chd1P40201 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Chd1P40201 Gm42632-201ENSMUST00000201707 2411 ntBASIC21.06■□□□□ 0.96
Chd1P40201 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd1P40201 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Chd1P40201 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Chd1P40201 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Chd1P40201 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd1P40201 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC21.05■□□□□ 0.96
Chd1P40201 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd1P40201 Gm43352-201ENSMUST00000196419 3065 ntBASIC21.05■□□□□ 0.96
Chd1P40201 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Chd1P40201 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Chd1P40201 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Chd1P40201 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC21.05■□□□□ 0.96
Chd1P40201 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd1P40201 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC21.05■□□□□ 0.96
Chd1P40201 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd1P40201 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Chd1P40201 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd1P40201 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd1P40201 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd1P40201 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd1P40201 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd1P40201 AC139054.1-201ENSMUST00000226898 1598 ntBASIC21.04■□□□□ 0.96
Chd1P40201 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC21.04■□□□□ 0.96
Chd1P40201 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Chd1P40201 Gm23270-201ENSMUST00000104055 131 ntBASIC21.04■□□□□ 0.96
Chd1P40201 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd1P40201 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd1P40201 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Chd1P40201 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd1P40201 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd1P40201 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC21.04■□□□□ 0.96
Chd1P40201 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Chd1P40201 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd1P40201 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC21.04■□□□□ 0.96
Chd1P40201 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd1P40201 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Chd1P40201 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Chd1P40201 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd1P40201 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd1P40201 Gm7467-201ENSMUST00000185173 652 ntBASIC21.04■□□□□ 0.96
Chd1P40201 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC21.04■□□□□ 0.96
Chd1P40201 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC21.04■□□□□ 0.96
Chd1P40201 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Chd1P40201 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC21.04■□□□□ 0.96
Chd1P40201 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.03■□□□□ 0.96
Chd1P40201 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd1P40201 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chd1P40201 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd1P40201 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd1P40201 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd1P40201 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd1P40201 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd1P40201 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC21.03■□□□□ 0.96
Chd1P40201 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chd1P40201 AC131997.1-201ENSMUST00000228611 1229 ntBASIC21.03■□□□□ 0.96
Chd1P40201 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd1P40201 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC21.03■□□□□ 0.96
Chd1P40201 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC21.03■□□□□ 0.96
Chd1P40201 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd1P40201 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd1P40201 BC037039-201ENSMUST00000192003 2205 ntBASIC21.02■□□□□ 0.96
Chd1P40201 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd1P40201 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd1P40201 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd1P40201 Gm8862-201ENSMUST00000198379 1346 ntBASIC21.02■□□□□ 0.96
Chd1P40201 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd1P40201 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd1P40201 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd1P40201 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chd1P40201 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd1P40201 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd1P40201 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms