Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a11P31650 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Slc6a11P31650 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.57□□□□□ -0.24
Slc6a11P31650 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a11P31650 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.57□□□□□ -0.24
Slc6a11P31650 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a11P31650 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a11P31650 Gm2451-201ENSMUST00000199447 999 ntBASIC13.57□□□□□ -0.24
Slc6a11P31650 Gm10290-201ENSMUST00000200451 999 ntBASIC13.57□□□□□ -0.24
Slc6a11P31650 Gm20949-201ENSMUST00000206478 952 ntBASIC13.57□□□□□ -0.24
Slc6a11P31650 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.57□□□□□ -0.24
Slc6a11P31650 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.57□□□□□ -0.24
Slc6a11P31650 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a11P31650 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a11P31650 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a11P31650 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a11P31650 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a11P31650 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a11P31650 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a11P31650 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a11P31650 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Slc6a11P31650 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a11P31650 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a11P31650 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a11P31650 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Slc6a11P31650 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Slc6a11P31650 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
Slc6a11P31650 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a11P31650 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a11P31650 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a11P31650 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a11P31650 Matn2-206ENSMUST00000228570 2798 ntBASIC13.56□□□□□ -0.24
Slc6a11P31650 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Slc6a11P31650 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a11P31650 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a11P31650 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a11P31650 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a11P31650 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Slc6a11P31650 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a11P31650 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a11P31650 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a11P31650 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.56□□□□□ -0.24
Slc6a11P31650 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.56□□□□□ -0.24
Slc6a11P31650 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Slc6a11P31650 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a11P31650 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.56□□□□□ -0.24
Slc6a11P31650 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a11P31650 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a11P31650 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a11P31650 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a11P31650 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a11P31650 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a11P31650 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a11P31650 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a11P31650 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.56□□□□□ -0.24
Slc6a11P31650 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.56□□□□□ -0.24
Slc6a11P31650 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Slc6a11P31650 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a11P31650 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a11P31650 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a11P31650 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a11P31650 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.56□□□□□ -0.24
Slc6a11P31650 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a11P31650 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Slc6a11P31650 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a11P31650 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.55□□□□□ -0.24
Slc6a11P31650 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Slc6a11P31650 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a11P31650 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Slc6a11P31650 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a11P31650 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a11P31650 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.55□□□□□ -0.24
Slc6a11P31650 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a11P31650 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a11P31650 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a11P31650 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.55□□□□□ -0.24
Slc6a11P31650 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a11P31650 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.55□□□□□ -0.24
Slc6a11P31650 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Slc6a11P31650 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Slc6a11P31650 Gm27301-201ENSMUST00000184012 127 ntBASIC13.55□□□□□ -0.24
Slc6a11P31650 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.55□□□□□ -0.24
Slc6a11P31650 Gm44335-201ENSMUST00000196879 141 ntBASIC13.55□□□□□ -0.24
Slc6a11P31650 Gm44297-201ENSMUST00000198304 141 ntBASIC13.55□□□□□ -0.24
Slc6a11P31650 Gm44346-201ENSMUST00000198851 141 ntBASIC13.55□□□□□ -0.24
Slc6a11P31650 Olfr286-202ENSMUST00000205305 969 ntBASIC13.55□□□□□ -0.24
Slc6a11P31650 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.55□□□□□ -0.24
Slc6a11P31650 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a11P31650 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a11P31650 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Slc6a11P31650 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a11P31650 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a11P31650 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a11P31650 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.55□□□□□ -0.24
Slc6a11P31650 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a11P31650 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a11P31650 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Slc6a11P31650 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a11P31650 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a11P31650 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms