Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Gm29541-201ENSMUST00000191351 678 ntBASIC12.95□□□□□ -0.34
VtnP29788 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VtnP29788 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
VtnP29788 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VtnP29788 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VtnP29788 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VtnP29788 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VtnP29788 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VtnP29788 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
VtnP29788 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VtnP29788 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VtnP29788 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
VtnP29788 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VtnP29788 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
VtnP29788 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VtnP29788 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VtnP29788 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VtnP29788 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VtnP29788 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VtnP29788 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
VtnP29788 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
VtnP29788 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.94□□□□□ -0.34
VtnP29788 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VtnP29788 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VtnP29788 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
VtnP29788 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VtnP29788 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VtnP29788 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.94□□□□□ -0.34
VtnP29788 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VtnP29788 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
VtnP29788 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.94□□□□□ -0.34
VtnP29788 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.94□□□□□ -0.34
VtnP29788 Gm12428-201ENSMUST00000119844 727 ntBASIC12.94□□□□□ -0.34
VtnP29788 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.94□□□□□ -0.34
VtnP29788 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
VtnP29788 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VtnP29788 Gm29310-201ENSMUST00000185468 696 ntBASIC12.94□□□□□ -0.34
VtnP29788 Gm21825-201ENSMUST00000185728 696 ntBASIC12.94□□□□□ -0.34
VtnP29788 Gm29109-201ENSMUST00000185895 696 ntBASIC12.94□□□□□ -0.34
VtnP29788 Gm21896-201ENSMUST00000186520 696 ntBASIC12.94□□□□□ -0.34
VtnP29788 Gm21873-201ENSMUST00000186728 696 ntBASIC12.94□□□□□ -0.34
VtnP29788 Gm21794-201ENSMUST00000187056 696 ntBASIC12.94□□□□□ -0.34
VtnP29788 Gm21880-201ENSMUST00000187275 696 ntBASIC12.94□□□□□ -0.34
VtnP29788 Gm21826-201ENSMUST00000187451 696 ntBASIC12.94□□□□□ -0.34
VtnP29788 Gm21198-201ENSMUST00000188393 696 ntBASIC12.94□□□□□ -0.34
VtnP29788 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.94□□□□□ -0.34
VtnP29788 Gm21749-201ENSMUST00000189343 696 ntBASIC12.94□□□□□ -0.34
VtnP29788 Gm21901-201ENSMUST00000189568 696 ntBASIC12.94□□□□□ -0.34
VtnP29788 Gm29424-201ENSMUST00000189716 696 ntBASIC12.94□□□□□ -0.34
VtnP29788 Gm28599-201ENSMUST00000189838 694 ntBASIC12.94□□□□□ -0.34
VtnP29788 Gm21867-201ENSMUST00000189917 696 ntBASIC12.94□□□□□ -0.34
VtnP29788 Gm29269-201ENSMUST00000190087 696 ntBASIC12.94□□□□□ -0.34
VtnP29788 Gm21722-201ENSMUST00000190153 696 ntBASIC12.94□□□□□ -0.34
VtnP29788 Gm28423-201ENSMUST00000190701 696 ntBASIC12.94□□□□□ -0.34
VtnP29788 Gm21899-201ENSMUST00000190745 696 ntBASIC12.94□□□□□ -0.34
VtnP29788 Gm21910-201ENSMUST00000191163 696 ntBASIC12.94□□□□□ -0.34
VtnP29788 Gm21849-201ENSMUST00000191571 696 ntBASIC12.94□□□□□ -0.34
VtnP29788 Gm28678-201ENSMUST00000191593 696 ntBASIC12.94□□□□□ -0.34
VtnP29788 Gm20910-201ENSMUST00000193268 696 ntBASIC12.94□□□□□ -0.34
VtnP29788 Gm21871-201ENSMUST00000194621 696 ntBASIC12.94□□□□□ -0.34
VtnP29788 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.94□□□□□ -0.34
VtnP29788 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.94□□□□□ -0.34
VtnP29788 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VtnP29788 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VtnP29788 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VtnP29788 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VtnP29788 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
VtnP29788 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.94□□□□□ -0.34
VtnP29788 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VtnP29788 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VtnP29788 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
VtnP29788 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VtnP29788 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
VtnP29788 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.94□□□□□ -0.34
VtnP29788 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VtnP29788 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
VtnP29788 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VtnP29788 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VtnP29788 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VtnP29788 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VtnP29788 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VtnP29788 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VtnP29788 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
VtnP29788 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
VtnP29788 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VtnP29788 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VtnP29788 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VtnP29788 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VtnP29788 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
VtnP29788 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VtnP29788 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VtnP29788 Gm13823-201ENSMUST00000119930 345 ntBASIC12.93□□□□□ -0.34
VtnP29788 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.93□□□□□ -0.34
VtnP29788 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.93□□□□□ -0.34
VtnP29788 Gm10275-202ENSMUST00000168697 495 ntBASIC12.93□□□□□ -0.34
VtnP29788 Gm18766-201ENSMUST00000189811 808 ntBASIC12.93□□□□□ -0.34
VtnP29788 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VtnP29788 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.93□□□□□ -0.34
VtnP29788 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VtnP29788 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms