Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.19□□□□□ -0.3
Nedd8P29595 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.19□□□□□ -0.3
Nedd8P29595 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.19□□□□□ -0.3
Nedd8P29595 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.19□□□□□ -0.3
Nedd8P29595 Gm22697-201ENSMUST00000175194 63 ntBASIC13.19□□□□□ -0.3
Nedd8P29595 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Nedd8P29595 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nedd8P29595 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nedd8P29595 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nedd8P29595 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Nedd8P29595 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nedd8P29595 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nedd8P29595 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nedd8P29595 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nedd8P29595 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Nedd8P29595 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nedd8P29595 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nedd8P29595 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.19□□□□□ -0.3
Nedd8P29595 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nedd8P29595 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nedd8P29595 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nedd8P29595 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nedd8P29595 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nedd8P29595 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nedd8P29595 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nedd8P29595 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Nedd8P29595 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.18□□□□□ -0.3
Nedd8P29595 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nedd8P29595 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
Nedd8P29595 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Nedd8P29595 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 Gm15358-201ENSMUST00000119249 520 ntBASIC13.18□□□□□ -0.3
Nedd8P29595 Gm8584-201ENSMUST00000171982 758 ntBASIC13.18□□□□□ -0.3
Nedd8P29595 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Nedd8P29595 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.18□□□□□ -0.3
Nedd8P29595 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.18□□□□□ -0.3
Nedd8P29595 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nedd8P29595 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nedd8P29595 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Nedd8P29595 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nedd8P29595 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nedd8P29595 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nedd8P29595 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nedd8P29595 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nedd8P29595 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nedd8P29595 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nedd8P29595 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nedd8P29595 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Nedd8P29595 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nedd8P29595 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.17□□□□□ -0.3
Nedd8P29595 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nedd8P29595 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nedd8P29595 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nedd8P29595 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.17□□□□□ -0.3
Nedd8P29595 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.17□□□□□ -0.3
Nedd8P29595 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nedd8P29595 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nedd8P29595 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nedd8P29595 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nedd8P29595 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Nedd8P29595 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Nedd8P29595 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nedd8P29595 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nedd8P29595 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.17□□□□□ -0.3
Nedd8P29595 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Nedd8P29595 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Nedd8P29595 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nedd8P29595 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nedd8P29595 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.16□□□□□ -0.3
Nedd8P29595 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nedd8P29595 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nedd8P29595 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nedd8P29595 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms