Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Cd48P18181 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cd48P18181 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd48P18181 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd48P18181 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.83□□□□□ -0.36
Cd48P18181 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cd48P18181 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd48P18181 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd48P18181 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd48P18181 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd48P18181 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cd48P18181 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd48P18181 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.83□□□□□ -0.36
Cd48P18181 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cd48P18181 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.83□□□□□ -0.36
Cd48P18181 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.83□□□□□ -0.36
Cd48P18181 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.83□□□□□ -0.36
Cd48P18181 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Cd48P18181 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd48P18181 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd48P18181 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd48P18181 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd48P18181 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cd48P18181 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd48P18181 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd48P18181 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd48P18181 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cd48P18181 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd48P18181 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd48P18181 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cd48P18181 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd48P18181 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd48P18181 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd48P18181 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd48P18181 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd48P18181 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd48P18181 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd48P18181 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd48P18181 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd48P18181 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cd48P18181 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cd48P18181 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cd48P18181 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Cd48P18181 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd48P18181 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd48P18181 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cd48P18181 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd48P18181 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.82□□□□□ -0.36
Cd48P18181 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cd48P18181 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Cd48P18181 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Cd48P18181 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd48P18181 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cd48P18181 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.82□□□□□ -0.36
Cd48P18181 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cd48P18181 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.82□□□□□ -0.36
Cd48P18181 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd48P18181 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd48P18181 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd48P18181 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.82□□□□□ -0.36
Cd48P18181 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.82□□□□□ -0.36
Cd48P18181 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Cd48P18181 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd48P18181 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cd48P18181 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Cd48P18181 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.82□□□□□ -0.36
Cd48P18181 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd48P18181 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd48P18181 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd48P18181 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd48P18181 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd48P18181 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cd48P18181 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd48P18181 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd48P18181 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd48P18181 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd48P18181 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd48P18181 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd48P18181 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd48P18181 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd48P18181 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd48P18181 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd48P18181 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
Cd48P18181 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd48P18181 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.81□□□□□ -0.36
Cd48P18181 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cd48P18181 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd48P18181 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd48P18181 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd48P18181 Gm14140-201ENSMUST00000119999 995 ntBASIC12.81□□□□□ -0.36
Cd48P18181 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd48P18181 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cd48P18181 Gm27301-201ENSMUST00000184012 127 ntBASIC12.81□□□□□ -0.36
Cd48P18181 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cd48P18181 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd48P18181 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd48P18181 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.81□□□□□ -0.36
Cd48P18181 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cd48P18181 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd48P18181 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms