Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmx1bO88609 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmx1bO88609 Gm15487-201ENSMUST00000122373 465 ntBASIC12.96□□□□□ -0.33
Lmx1bO88609 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.96□□□□□ -0.33
Lmx1bO88609 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.96□□□□□ -0.33
Lmx1bO88609 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmx1bO88609 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmx1bO88609 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lmx1bO88609 Olfr286-202ENSMUST00000205305 969 ntBASIC12.96□□□□□ -0.33
Lmx1bO88609 Gm7775-201ENSMUST00000218871 853 ntBASIC12.96□□□□□ -0.33
Lmx1bO88609 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.96□□□□□ -0.33
Lmx1bO88609 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Lmx1bO88609 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Lmx1bO88609 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmx1bO88609 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmx1bO88609 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.96□□□□□ -0.33
Lmx1bO88609 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmx1bO88609 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.96□□□□□ -0.33
Lmx1bO88609 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.96□□□□□ -0.33
Lmx1bO88609 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lmx1bO88609 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lmx1bO88609 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Lmx1bO88609 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Lmx1bO88609 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Lmx1bO88609 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.96□□□□□ -0.34
Lmx1bO88609 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Lmx1bO88609 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
Lmx1bO88609 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Lmx1bO88609 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lmx1bO88609 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmx1bO88609 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmx1bO88609 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Lmx1bO88609 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmx1bO88609 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Lmx1bO88609 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lmx1bO88609 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmx1bO88609 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmx1bO88609 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmx1bO88609 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.95□□□□□ -0.34
Lmx1bO88609 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmx1bO88609 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmx1bO88609 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lmx1bO88609 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmx1bO88609 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.95□□□□□ -0.34
Lmx1bO88609 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.95□□□□□ -0.34
Lmx1bO88609 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.95□□□□□ -0.34
Lmx1bO88609 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lmx1bO88609 Mir7684-201ENSMUST00000183858 60 ntBASIC12.95□□□□□ -0.34
Lmx1bO88609 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lmx1bO88609 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lmx1bO88609 Gm37230-201ENSMUST00000194491 818 ntBASIC12.95□□□□□ -0.34
Lmx1bO88609 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.95□□□□□ -0.34
Lmx1bO88609 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lmx1bO88609 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.95□□□□□ -0.34
Lmx1bO88609 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lmx1bO88609 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.95□□□□□ -0.34
Lmx1bO88609 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lmx1bO88609 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Lmx1bO88609 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmx1bO88609 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lmx1bO88609 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Lmx1bO88609 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmx1bO88609 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmx1bO88609 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmx1bO88609 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lmx1bO88609 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmx1bO88609 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmx1bO88609 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Lmx1bO88609 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lmx1bO88609 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lmx1bO88609 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.94□□□□□ -0.34
Lmx1bO88609 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lmx1bO88609 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lmx1bO88609 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lmx1bO88609 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.94□□□□□ -0.34
Lmx1bO88609 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lmx1bO88609 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lmx1bO88609 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lmx1bO88609 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Lmx1bO88609 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Lmx1bO88609 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Lmx1bO88609 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Lmx1bO88609 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lmx1bO88609 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lmx1bO88609 Gm6222-201ENSMUST00000120787 396 ntBASIC12.94□□□□□ -0.34
Lmx1bO88609 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.94□□□□□ -0.34
Lmx1bO88609 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.94□□□□□ -0.34
Lmx1bO88609 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.94□□□□□ -0.34
Lmx1bO88609 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.94□□□□□ -0.34
Lmx1bO88609 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lmx1bO88609 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lmx1bO88609 Gm23547-201ENSMUST00000158210 271 ntBASIC12.94□□□□□ -0.34
Lmx1bO88609 Gm5866-201ENSMUST00000177881 973 ntBASIC12.94□□□□□ -0.34
Lmx1bO88609 Gm27680-201ENSMUST00000184192 160 ntBASIC12.94□□□□□ -0.34
Lmx1bO88609 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lmx1bO88609 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lmx1bO88609 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lmx1bO88609 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lmx1bO88609 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lmx1bO88609 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms