Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cops6O88545 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cops6O88545 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cops6O88545 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cops6O88545 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cops6O88545 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cops6O88545 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cops6O88545 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cops6O88545 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cops6O88545 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cops6O88545 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cops6O88545 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cops6O88545 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Cops6O88545 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cops6O88545 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cops6O88545 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cops6O88545 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cops6O88545 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cops6O88545 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cops6O88545 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cops6O88545 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC17.36■□□□□ 0.37
Cops6O88545 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC17.36■□□□□ 0.37
Cops6O88545 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC17.36■□□□□ 0.37
Cops6O88545 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Cops6O88545 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cops6O88545 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cops6O88545 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cops6O88545 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cops6O88545 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cops6O88545 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cops6O88545 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cops6O88545 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cops6O88545 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cops6O88545 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cops6O88545 Gm45630-201ENSMUST00000210243 1911 ntBASIC17.35■□□□□ 0.37
Cops6O88545 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cops6O88545 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cops6O88545 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cops6O88545 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cops6O88545 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cops6O88545 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cops6O88545 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC17.35■□□□□ 0.37
Cops6O88545 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cops6O88545 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC17.35■□□□□ 0.37
Cops6O88545 Gm9002-201ENSMUST00000178437 499 ntBASIC17.35■□□□□ 0.37
Cops6O88545 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC17.35■□□□□ 0.37
Cops6O88545 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC17.35■□□□□ 0.37
Cops6O88545 Gm18905-201ENSMUST00000205454 928 ntBASIC17.35■□□□□ 0.37
Cops6O88545 Gm18307-201ENSMUST00000206864 949 ntBASIC17.35■□□□□ 0.37
Cops6O88545 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Cops6O88545 AC155252.1-201ENSMUST00000226462 1208 ntBASIC17.35■□□□□ 0.37
Cops6O88545 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cops6O88545 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cops6O88545 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cops6O88545 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cops6O88545 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cops6O88545 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.35■□□□□ 0.37
Cops6O88545 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cops6O88545 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cops6O88545 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cops6O88545 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cops6O88545 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cops6O88545 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cops6O88545 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC17.34■□□□□ 0.37
Cops6O88545 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cops6O88545 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cops6O88545 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Cops6O88545 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cops6O88545 Gm5035-201ENSMUST00000215581 927 ntBASIC17.34■□□□□ 0.37
Cops6O88545 Gm7446-201ENSMUST00000221035 1240 ntBASIC17.34■□□□□ 0.37
Cops6O88545 AC150560.1-201ENSMUST00000227731 1187 ntBASIC17.34■□□□□ 0.37
Cops6O88545 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cops6O88545 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cops6O88545 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cops6O88545 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cops6O88545 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cops6O88545 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Cops6O88545 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cops6O88545 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cops6O88545 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cops6O88545 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cops6O88545 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cops6O88545 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cops6O88545 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cops6O88545 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cops6O88545 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cops6O88545 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cops6O88545 Gm8131-201ENSMUST00000213783 1570 ntBASIC17.33■□□□□ 0.37
Cops6O88545 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cops6O88545 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cops6O88545 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC17.33■□□□□ 0.36
Cops6O88545 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cops6O88545 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC17.33■□□□□ 0.36
Cops6O88545 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC17.33■□□□□ 0.36
Cops6O88545 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cops6O88545 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cops6O88545 AC155258.1-201ENSMUST00000219303 253 ntBASIC17.33■□□□□ 0.36
Cops6O88545 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cops6O88545 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cops6O88545 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms