Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1bO88384 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1bO88384 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1bO88384 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1bO88384 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.64□□□□□ -0.23
Vti1bO88384 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1bO88384 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1bO88384 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1bO88384 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1bO88384 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.63□□□□□ -0.23
Vti1bO88384 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1bO88384 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1bO88384 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1bO88384 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.63□□□□□ -0.23
Vti1bO88384 Gm14494-201ENSMUST00000118786 435 ntBASIC13.63□□□□□ -0.23
Vti1bO88384 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Vti1bO88384 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1bO88384 Mir3113-201ENSMUST00000175478 76 ntBASIC13.63□□□□□ -0.23
Vti1bO88384 Gm8000-201ENSMUST00000188378 592 ntBASIC13.63□□□□□ -0.23
Vti1bO88384 Gm5264-201ENSMUST00000190584 848 ntBASIC13.63□□□□□ -0.23
Vti1bO88384 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.63□□□□□ -0.23
Vti1bO88384 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.63□□□□□ -0.23
Vti1bO88384 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.63□□□□□ -0.23
Vti1bO88384 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1bO88384 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1bO88384 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1bO88384 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1bO88384 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.63□□□□□ -0.23
Vti1bO88384 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1bO88384 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1bO88384 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1bO88384 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Vti1bO88384 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1bO88384 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1bO88384 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1bO88384 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1bO88384 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1bO88384 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1bO88384 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1bO88384 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1bO88384 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1bO88384 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1bO88384 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1bO88384 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1bO88384 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Vti1bO88384 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1bO88384 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.62□□□□□ -0.23
Vti1bO88384 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1bO88384 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1bO88384 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1bO88384 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Vti1bO88384 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Vti1bO88384 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1bO88384 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1bO88384 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1bO88384 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Vti1bO88384 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.62□□□□□ -0.23
Vti1bO88384 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.62□□□□□ -0.23
Vti1bO88384 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1bO88384 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.62□□□□□ -0.23
Vti1bO88384 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.62□□□□□ -0.23
Vti1bO88384 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1bO88384 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Vti1bO88384 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.62□□□□□ -0.23
Vti1bO88384 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1bO88384 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.62□□□□□ -0.23
Vti1bO88384 Gm45747-201ENSMUST00000212203 999 ntBASIC13.62□□□□□ -0.23
Vti1bO88384 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1bO88384 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1bO88384 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1bO88384 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1bO88384 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1bO88384 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1bO88384 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Vti1bO88384 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.62□□□□□ -0.23
Vti1bO88384 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1bO88384 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1bO88384 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.62□□□□□ -0.23
Vti1bO88384 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1bO88384 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.62□□□□□ -0.23
Vti1bO88384 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1bO88384 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1bO88384 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1bO88384 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1bO88384 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1bO88384 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Vti1bO88384 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1bO88384 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1bO88384 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Vti1bO88384 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1bO88384 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1bO88384 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1bO88384 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Vti1bO88384 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1bO88384 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1bO88384 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1bO88384 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.61□□□□□ -0.23
Vti1bO88384 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1bO88384 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1bO88384 Gm16198-201ENSMUST00000118766 670 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms