Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim1O70400 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim1O70400 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.11□□□□□ -0.15
Pdlim1O70400 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim1O70400 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim1O70400 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Pdlim1O70400 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim1O70400 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim1O70400 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim1O70400 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim1O70400 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim1O70400 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.11□□□□□ -0.15
Pdlim1O70400 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim1O70400 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.11□□□□□ -0.15
Pdlim1O70400 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.1□□□□□ -0.15
Pdlim1O70400 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pdlim1O70400 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Gm13453-201ENSMUST00000118708 357 ntBASIC14.1□□□□□ -0.15
Pdlim1O70400 Gm14767-201ENSMUST00000121559 586 ntBASIC14.1□□□□□ -0.15
Pdlim1O70400 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 AA543401-201ENSMUST00000164248 1269 ntBASIC14.1□□□□□ -0.15
Pdlim1O70400 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.1□□□□□ -0.15
Pdlim1O70400 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pdlim1O70400 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Pdlim1O70400 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pdlim1O70400 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.1□□□□□ -0.15
Pdlim1O70400 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pdlim1O70400 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.1□□□□□ -0.15
Pdlim1O70400 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim1O70400 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Pdlim1O70400 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim1O70400 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim1O70400 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim1O70400 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim1O70400 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim1O70400 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim1O70400 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim1O70400 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim1O70400 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim1O70400 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim1O70400 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim1O70400 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pdlim1O70400 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim1O70400 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim1O70400 Gm27680-201ENSMUST00000184192 160 ntBASIC14.09□□□□□ -0.15
Pdlim1O70400 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Pdlim1O70400 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Pdlim1O70400 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.09□□□□□ -0.15
Pdlim1O70400 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.09□□□□□ -0.15
Pdlim1O70400 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.09□□□□□ -0.15
Pdlim1O70400 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.09□□□□□ -0.15
Pdlim1O70400 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.09□□□□□ -0.15
Pdlim1O70400 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim1O70400 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.09□□□□□ -0.15
Pdlim1O70400 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim1O70400 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim1O70400 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim1O70400 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim1O70400 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim1O70400 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim1O70400 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Pdlim1O70400 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.09□□□□□ -0.15
Pdlim1O70400 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim1O70400 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim1O70400 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Pdlim1O70400 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms