Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Copb2O55029 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Copb2O55029 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Copb2O55029 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Copb2O55029 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Copb2O55029 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.39■□□□□ 0.21
Copb2O55029 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Copb2O55029 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Copb2O55029 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Copb2O55029 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Copb2O55029 Gm22189-201ENSMUST00000103822 86 ntBASIC16.39■□□□□ 0.21
Copb2O55029 Gm15460-201ENSMUST00000118147 391 ntBASIC16.39■□□□□ 0.21
Copb2O55029 Gm14928-201ENSMUST00000120198 477 ntBASIC16.39■□□□□ 0.21
Copb2O55029 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.39■□□□□ 0.21
Copb2O55029 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Copb2O55029 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.39■□□□□ 0.21
Copb2O55029 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Copb2O55029 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Copb2O55029 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Copb2O55029 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Copb2O55029 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Copb2O55029 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.39■□□□□ 0.21
Copb2O55029 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Copb2O55029 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.38■□□□□ 0.21
Copb2O55029 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Copb2O55029 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Copb2O55029 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Copb2O55029 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Copb2O55029 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Copb2O55029 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Copb2O55029 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Copb2O55029 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Copb2O55029 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Copb2O55029 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Copb2O55029 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.38■□□□□ 0.21
Copb2O55029 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Copb2O55029 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.38■□□□□ 0.21
Copb2O55029 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Copb2O55029 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Copb2O55029 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Copb2O55029 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.38■□□□□ 0.21
Copb2O55029 Gm12882-201ENSMUST00000121696 517 ntBASIC16.38■□□□□ 0.21
Copb2O55029 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.38■□□□□ 0.21
Copb2O55029 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Copb2O55029 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.38■□□□□ 0.21
Copb2O55029 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.38■□□□□ 0.21
Copb2O55029 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.38■□□□□ 0.21
Copb2O55029 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Copb2O55029 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.38■□□□□ 0.21
Copb2O55029 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Copb2O55029 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.38■□□□□ 0.21
Copb2O55029 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.38■□□□□ 0.21
Copb2O55029 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Copb2O55029 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Copb2O55029 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Copb2O55029 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Copb2O55029 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Copb2O55029 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.38■□□□□ 0.21
Copb2O55029 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Copb2O55029 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.38■□□□□ 0.21
Copb2O55029 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Copb2O55029 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Copb2O55029 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Copb2O55029 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Copb2O55029 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Copb2O55029 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Copb2O55029 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Copb2O55029 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Copb2O55029 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Copb2O55029 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.37■□□□□ 0.21
Copb2O55029 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.37■□□□□ 0.21
Copb2O55029 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Copb2O55029 Gm10766-202ENSMUST00000194123 606 ntBASIC16.37■□□□□ 0.21
Copb2O55029 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Copb2O55029 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Copb2O55029 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Copb2O55029 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Copb2O55029 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Copb2O55029 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Copb2O55029 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Copb2O55029 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Copb2O55029 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Copb2O55029 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Copb2O55029 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Copb2O55029 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.36■□□□□ 0.21
Copb2O55029 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Copb2O55029 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Copb2O55029 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Copb2O55029 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Copb2O55029 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Copb2O55029 Gm15393-201ENSMUST00000120499 219 ntBASIC16.36■□□□□ 0.21
Copb2O55029 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Copb2O55029 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Copb2O55029 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.36■□□□□ 0.21
Copb2O55029 Gm21854-201ENSMUST00000179901 471 ntBASIC16.36■□□□□ 0.21
Copb2O55029 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Copb2O55029 Gm9797-201ENSMUST00000052902 613 ntBASIC16.36■□□□□ 0.21
Copb2O55029 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Copb2O55029 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Copb2O55029 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms