Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm17535J3KMR8 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm17535J3KMR8 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm17535J3KMR8 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm17535J3KMR8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm17535J3KMR8 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm17535J3KMR8 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm17535J3KMR8 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.15■□□□□ 0.02
Gm17535J3KMR8 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm17535J3KMR8 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm17535J3KMR8 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm17535J3KMR8 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm17535J3KMR8 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm17535J3KMR8 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm17535J3KMR8 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm17535J3KMR8 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.14■□□□□ 0.01
Gm17535J3KMR8 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.14■□□□□ 0.01
Gm17535J3KMR8 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.14■□□□□ 0.01
Gm17535J3KMR8 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm17535J3KMR8 Gm9797-201ENSMUST00000052902 613 ntBASIC15.14■□□□□ 0.01
Gm17535J3KMR8 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm17535J3KMR8 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Gm17535J3KMR8 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Gm17535J3KMR8 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm17535J3KMR8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm17535J3KMR8 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm17535J3KMR8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Gm17535J3KMR8 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm17535J3KMR8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm17535J3KMR8 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Gm17535J3KMR8 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm17535J3KMR8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm17535J3KMR8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm17535J3KMR8 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm17535J3KMR8 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm17535J3KMR8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm17535J3KMR8 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm17535J3KMR8 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm17535J3KMR8 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm17535J3KMR8 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm17535J3KMR8 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm17535J3KMR8 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Gm17535J3KMR8 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Gm17535J3KMR8 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.13■□□□□ 0.01
Gm17535J3KMR8 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm17535J3KMR8 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm17535J3KMR8 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm17535J3KMR8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm17535J3KMR8 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm17535J3KMR8 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm17535J3KMR8 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm17535J3KMR8 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Gm17535J3KMR8 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm17535J3KMR8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm17535J3KMR8 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Gm17535J3KMR8 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm17535J3KMR8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm17535J3KMR8 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm17535J3KMR8 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Gm17535J3KMR8 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm17535J3KMR8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm17535J3KMR8 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm17535J3KMR8 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Gm17535J3KMR8 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm17535J3KMR8 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Gm17535J3KMR8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm17535J3KMR8 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm17535J3KMR8 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.12■□□□□ 0.01
Gm17535J3KMR8 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm17535J3KMR8 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm17535J3KMR8 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Gm17535J3KMR8 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Gm17535J3KMR8 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm17535J3KMR8 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.12■□□□□ 0.01
Gm17535J3KMR8 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Gm17535J3KMR8 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm17535J3KMR8 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm17535J3KMR8 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm17535J3KMR8 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm17535J3KMR8 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.12■□□□□ 0.01
Gm17535J3KMR8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm17535J3KMR8 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm17535J3KMR8 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Gm17535J3KMR8 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm17535J3KMR8 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm17535J3KMR8 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm17535J3KMR8 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm17535J3KMR8 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.11■□□□□ 0.01
Gm17535J3KMR8 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm17535J3KMR8 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm17535J3KMR8 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm17535J3KMR8 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Gm17535J3KMR8 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm17535J3KMR8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm17535J3KMR8 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm17535J3KMR8 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Gm17535J3KMR8 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.11■□□□□ 0.01
Gm17535J3KMR8 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm17535J3KMR8 Gm12859-201ENSMUST00000117834 427 ntBASIC15.11■□□□□ 0.01
Gm17535J3KMR8 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms