Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Snora73a-201ENSMUST00000082453 205 ntBASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a6B1AVK5 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Gm13123-201ENSMUST00000122173 492 ntBASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Gm27501-201ENSMUST00000183599 107 ntBASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Gm3786-201ENSMUST00000202659 378 ntBASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Itm2b-204ENSMUST00000228637 783 ntBASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Gm38266-201ENSMUST00000194931 421 ntBASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Gm45880-201ENSMUST00000213041 853 ntBASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a6B1AVK5 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a6B1AVK5 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Col4a6B1AVK5 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Col4a6B1AVK5 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a6B1AVK5 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a6B1AVK5 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a6B1AVK5 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a6B1AVK5 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.38□□□□□ -0.11
Col4a6B1AVK5 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a6B1AVK5 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms