Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.97□□□□□ -0.17
Chd3B1AR17 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd3B1AR17 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.97□□□□□ -0.17
Chd3B1AR17 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd3B1AR17 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Chd3B1AR17 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd3B1AR17 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Chd3B1AR17 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd3B1AR17 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.97□□□□□ -0.17
Chd3B1AR17 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd3B1AR17 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.97□□□□□ -0.17
Chd3B1AR17 Gm28760-201ENSMUST00000185995 736 ntBASIC13.97□□□□□ -0.17
Chd3B1AR17 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chd3B1AR17 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.97□□□□□ -0.17
Chd3B1AR17 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.97□□□□□ -0.17
Chd3B1AR17 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.97□□□□□ -0.17
Chd3B1AR17 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd3B1AR17 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd3B1AR17 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd3B1AR17 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd3B1AR17 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd3B1AR17 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd3B1AR17 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd3B1AR17 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chd3B1AR17 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Chd3B1AR17 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd3B1AR17 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd3B1AR17 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Chd3B1AR17 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd3B1AR17 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Chd3B1AR17 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chd3B1AR17 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.96□□□□□ -0.17
Chd3B1AR17 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd3B1AR17 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd3B1AR17 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Chd3B1AR17 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd3B1AR17 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd3B1AR17 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.96□□□□□ -0.17
Chd3B1AR17 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Chd3B1AR17 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd3B1AR17 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.96□□□□□ -0.17
Chd3B1AR17 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd3B1AR17 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd3B1AR17 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd3B1AR17 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
Chd3B1AR17 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Chd3B1AR17 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Chd3B1AR17 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.96□□□□□ -0.18
Chd3B1AR17 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Chd3B1AR17 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Chd3B1AR17 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.95□□□□□ -0.18
Chd3B1AR17 Gm9794-201ENSMUST00000202370 423 ntBASIC13.95□□□□□ -0.18
Chd3B1AR17 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chd3B1AR17 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Chd3B1AR17 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Chd3B1AR17 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chd3B1AR17 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chd3B1AR17 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chd3B1AR17 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chd3B1AR17 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chd3B1AR17 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Chd3B1AR17 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.95□□□□□ -0.18
Chd3B1AR17 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Chd3B1AR17 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chd3B1AR17 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chd3B1AR17 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.95□□□□□ -0.18
Chd3B1AR17 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.95□□□□□ -0.18
Chd3B1AR17 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.95□□□□□ -0.18
Chd3B1AR17 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.95□□□□□ -0.18
Chd3B1AR17 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.95□□□□□ -0.18
Chd3B1AR17 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.95□□□□□ -0.18
Chd3B1AR17 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.95□□□□□ -0.18
Chd3B1AR17 Gm46209-201ENSMUST00000217912 553 ntBASIC13.95□□□□□ -0.18
Chd3B1AR17 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chd3B1AR17 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chd3B1AR17 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chd3B1AR17 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chd3B1AR17 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Chd3B1AR17 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chd3B1AR17 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chd3B1AR17 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chd3B1AR17 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chd3B1AR17 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chd3B1AR17 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chd3B1AR17 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Chd3B1AR17 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chd3B1AR17 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chd3B1AR17 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chd3B1AR17 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Chd3B1AR17 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chd3B1AR17 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chd3B1AR17 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chd3B1AR17 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chd3B1AR17 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chd3B1AR17 Gm12882-201ENSMUST00000121696 517 ntBASIC13.94□□□□□ -0.18
Chd3B1AR17 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Chd3B1AR17 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Chd3B1AR17 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chd3B1AR17 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Chd3B1AR17 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms