Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.03□□□□□ -0.48
Col6a4A2AX52 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.03□□□□□ -0.48
Col6a4A2AX52 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.03□□□□□ -0.48
Col6a4A2AX52 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a4A2AX52 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Gm17794-201ENSMUST00000220252 955 ntBASIC12.03□□□□□ -0.48
Col6a4A2AX52 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a4A2AX52 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Col6a4A2AX52 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Col6a4A2AX52 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col6a4A2AX52 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col6a4A2AX52 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col6a4A2AX52 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Col6a4A2AX52 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Gm14723-201ENSMUST00000118686 215 ntBASIC12.02□□□□□ -0.49
Col6a4A2AX52 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Gm38241-201ENSMUST00000192641 898 ntBASIC12.02□□□□□ -0.49
Col6a4A2AX52 Gm18054-201ENSMUST00000207539 555 ntBASIC12.02□□□□□ -0.49
Col6a4A2AX52 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a4A2AX52 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.02□□□□□ -0.49
Col6a4A2AX52 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Col6a4A2AX52 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a4A2AX52 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Col6a4A2AX52 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a4A2AX52 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Col6a4A2AX52 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Col6a4A2AX52 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a4A2AX52 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a4A2AX52 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a4A2AX52 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Col6a4A2AX52 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a4A2AX52 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Col6a4A2AX52 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a4A2AX52 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.01□□□□□ -0.49
Col6a4A2AX52 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Col6a4A2AX52 Gm45244-201ENSMUST00000211328 2200 ntBASIC12.01□□□□□ -0.49
Col6a4A2AX52 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a4A2AX52 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a4A2AX52 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.01□□□□□ -0.49
Col6a4A2AX52 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a4A2AX52 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.01□□□□□ -0.49
Col6a4A2AX52 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.01□□□□□ -0.49
Col6a4A2AX52 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a4A2AX52 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.01□□□□□ -0.49
Col6a4A2AX52 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a4A2AX52 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a4A2AX52 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Col6a4A2AX52 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a4A2AX52 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a4A2AX52 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a4A2AX52 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a4A2AX52 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Col6a4A2AX52 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a4A2AX52 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a4A2AX52 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
Col6a4A2AX52 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Col6a4A2AX52 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12□□□□□ -0.49
Col6a4A2AX52 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms