Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 AC155729.1-201ENSMUST00000227758 544 ntBASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Gm37691-201ENSMUST00000192147 2573 ntBASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Gm6376-201ENSMUST00000209407 580 ntBASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Ssr1-204ENSMUST00000225319 1610 ntBASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Gm37844-201ENSMUST00000192473 4097 ntBASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Gm42471-201ENSMUST00000201457 1865 ntBASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms