Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim3Q9R1R2 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Trim3Q9R1R2 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim3Q9R1R2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim3Q9R1R2 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim3Q9R1R2 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim3Q9R1R2 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim3Q9R1R2 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim3Q9R1R2 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim3Q9R1R2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim3Q9R1R2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim3Q9R1R2 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.47□□□□□ -0.25
Trim3Q9R1R2 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Trim3Q9R1R2 Gm18889-201ENSMUST00000174284 929 ntBASIC13.47□□□□□ -0.25
Trim3Q9R1R2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.47□□□□□ -0.25
Trim3Q9R1R2 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.47□□□□□ -0.25
Trim3Q9R1R2 Gm18057-201ENSMUST00000208220 503 ntBASIC13.47□□□□□ -0.25
Trim3Q9R1R2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.47□□□□□ -0.25
Trim3Q9R1R2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim3Q9R1R2 Gm8396-201ENSMUST00000057361 823 ntBASIC13.47□□□□□ -0.25
Trim3Q9R1R2 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim3Q9R1R2 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Trim3Q9R1R2 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim3Q9R1R2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim3Q9R1R2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim3Q9R1R2 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim3Q9R1R2 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim3Q9R1R2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim3Q9R1R2 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim3Q9R1R2 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim3Q9R1R2 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Gm23547-201ENSMUST00000158210 271 ntBASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Gm44335-201ENSMUST00000196879 141 ntBASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Gm44297-201ENSMUST00000198304 141 ntBASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Gm44346-201ENSMUST00000198851 141 ntBASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim3Q9R1R2 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim3Q9R1R2 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trim3Q9R1R2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim3Q9R1R2 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trim3Q9R1R2 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim3Q9R1R2 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim3Q9R1R2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim3Q9R1R2 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim3Q9R1R2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim3Q9R1R2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Gm6973-201ENSMUST00000117080 721 ntBASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Mir6990-201ENSMUST00000183724 91 ntBASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trim3Q9R1R2 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms