Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn3Q9ES97 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn3Q9ES97 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.25■□□□□ 0.03
Rtn3Q9ES97 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Rtn3Q9ES97 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn3Q9ES97 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn3Q9ES97 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Gm11543-201ENSMUST00000120758 370 ntBASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Gm10576-201ENSMUST00000191927 825 ntBASIC15.24■□□□□ 0.03
Rtn3Q9ES97 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.24■□□□□ 0.03
Rtn3Q9ES97 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn3Q9ES97 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn3Q9ES97 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn3Q9ES97 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn3Q9ES97 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rtn3Q9ES97 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn3Q9ES97 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn3Q9ES97 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
Rtn3Q9ES97 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rtn3Q9ES97 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.23■□□□□ 0.03
Rtn3Q9ES97 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn3Q9ES97 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn3Q9ES97 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn3Q9ES97 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn3Q9ES97 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rtn3Q9ES97 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rtn3Q9ES97 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.23■□□□□ 0.03
Rtn3Q9ES97 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.23■□□□□ 0.03
Rtn3Q9ES97 Gm15483-201ENSMUST00000120338 456 ntBASIC15.23■□□□□ 0.03
Rtn3Q9ES97 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.23■□□□□ 0.03
Rtn3Q9ES97 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.23■□□□□ 0.03
Rtn3Q9ES97 Gm43474-201ENSMUST00000196415 774 ntBASIC15.23■□□□□ 0.03
Rtn3Q9ES97 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.23■□□□□ 0.03
Rtn3Q9ES97 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.23■□□□□ 0.03
Rtn3Q9ES97 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn3Q9ES97 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn3Q9ES97 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Rtn3Q9ES97 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn3Q9ES97 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn3Q9ES97 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Gm2451-201ENSMUST00000199447 999 ntBASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Gm10290-201ENSMUST00000200451 999 ntBASIC15.22■□□□□ 0.03
Rtn3Q9ES97 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms