Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc7Q9D541 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.72■□□□□ 0.27
Ccdc7Q9D541 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc7Q9D541 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc7Q9D541 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc7Q9D541 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc7Q9D541 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc7Q9D541 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc7Q9D541 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc7Q9D541 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Ccdc7Q9D541 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ccdc7Q9D541 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc7Q9D541 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc7Q9D541 Gm15957-201ENSMUST00000118893 974 ntBASIC16.71■□□□□ 0.27
Ccdc7Q9D541 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.71■□□□□ 0.27
Ccdc7Q9D541 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.71■□□□□ 0.27
Ccdc7Q9D541 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.71■□□□□ 0.27
Ccdc7Q9D541 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.71■□□□□ 0.27
Ccdc7Q9D541 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc7Q9D541 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc7Q9D541 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc7Q9D541 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ccdc7Q9D541 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc7Q9D541 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc7Q9D541 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc7Q9D541 Gm5639-201ENSMUST00000122305 2403 ntBASIC16.71■□□□□ 0.27
Ccdc7Q9D541 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc7Q9D541 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc7Q9D541 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ccdc7Q9D541 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Ccdc7Q9D541 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc7Q9D541 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc7Q9D541 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc7Q9D541 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.7■□□□□ 0.26
Ccdc7Q9D541 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc7Q9D541 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc7Q9D541 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc7Q9D541 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc7Q9D541 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc7Q9D541 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc7Q9D541 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc7Q9D541 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.7■□□□□ 0.26
Ccdc7Q9D541 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ccdc7Q9D541 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc7Q9D541 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.7■□□□□ 0.26
Ccdc7Q9D541 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ccdc7Q9D541 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc7Q9D541 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc7Q9D541 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ccdc7Q9D541 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc7Q9D541 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc7Q9D541 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ccdc7Q9D541 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc7Q9D541 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc7Q9D541 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc7Q9D541 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc7Q9D541 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Gm14494-201ENSMUST00000118786 435 ntBASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.69■□□□□ 0.26
Ccdc7Q9D541 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.68■□□□□ 0.26
Ccdc7Q9D541 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc7Q9D541 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc7Q9D541 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc7Q9D541 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc7Q9D541 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.68■□□□□ 0.26
Ccdc7Q9D541 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc7Q9D541 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms