Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.06□□□□□ -0.16
5530400C23RikQ9D3I0 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
5530400C23RikQ9D3I0 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
5530400C23RikQ9D3I0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
5530400C23RikQ9D3I0 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.06□□□□□ -0.16
5530400C23RikQ9D3I0 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
5530400C23RikQ9D3I0 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.06□□□□□ -0.16
5530400C23RikQ9D3I0 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
5530400C23RikQ9D3I0 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
5530400C23RikQ9D3I0 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
5530400C23RikQ9D3I0 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Gm23935-201ENSMUST00000102303 57 ntBASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Gm24270-201ENSMUST00000102326 57 ntBASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Gm24245-201ENSMUST00000157318 57 ntBASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
5530400C23RikQ9D3I0 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
5530400C23RikQ9D3I0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
5530400C23RikQ9D3I0 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
5530400C23RikQ9D3I0 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
5530400C23RikQ9D3I0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
5530400C23RikQ9D3I0 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
5530400C23RikQ9D3I0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
5530400C23RikQ9D3I0 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
5530400C23RikQ9D3I0 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
5530400C23RikQ9D3I0 Gm26308-201ENSMUST00000157768 69 ntBASIC14.03□□□□□ -0.16
5530400C23RikQ9D3I0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
5530400C23RikQ9D3I0 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
5530400C23RikQ9D3I0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
5530400C23RikQ9D3I0 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
5530400C23RikQ9D3I0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
5530400C23RikQ9D3I0 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
5530400C23RikQ9D3I0 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms