Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim13Q9CYB0 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim13Q9CYB0 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim13Q9CYB0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim13Q9CYB0 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim13Q9CYB0 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim13Q9CYB0 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim13Q9CYB0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim13Q9CYB0 Gm7153-201ENSMUST00000117092 455 ntBASIC13.23□□□□□ -0.29
Trim13Q9CYB0 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.23□□□□□ -0.29
Trim13Q9CYB0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim13Q9CYB0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim13Q9CYB0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim13Q9CYB0 Gm9726-201ENSMUST00000180321 678 ntBASIC13.23□□□□□ -0.29
Trim13Q9CYB0 Gm6089-201ENSMUST00000197666 938 ntBASIC13.23□□□□□ -0.29
Trim13Q9CYB0 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim13Q9CYB0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim13Q9CYB0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.23□□□□□ -0.29
Trim13Q9CYB0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim13Q9CYB0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim13Q9CYB0 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.23□□□□□ -0.29
Trim13Q9CYB0 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim13Q9CYB0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trim13Q9CYB0 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim13Q9CYB0 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim13Q9CYB0 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim13Q9CYB0 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Gm8749-201ENSMUST00000117737 331 ntBASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim13Q9CYB0 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim13Q9CYB0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim13Q9CYB0 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim13Q9CYB0 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trim13Q9CYB0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim13Q9CYB0 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.21□□□□□ -0.29
Trim13Q9CYB0 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim13Q9CYB0 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.21□□□□□ -0.29
Trim13Q9CYB0 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim13Q9CYB0 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim13Q9CYB0 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim13Q9CYB0 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim13Q9CYB0 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim13Q9CYB0 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim13Q9CYB0 Gm24589-201ENSMUST00000116692 94 ntBASIC13.21□□□□□ -0.29
Trim13Q9CYB0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim13Q9CYB0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trim13Q9CYB0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.21□□□□□ -0.29
Trim13Q9CYB0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Trim13Q9CYB0 Gm7787-201ENSMUST00000216858 688 ntBASIC13.21□□□□□ -0.29
Trim13Q9CYB0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim13Q9CYB0 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim13Q9CYB0 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim13Q9CYB0 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim13Q9CYB0 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim13Q9CYB0 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim13Q9CYB0 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim13Q9CYB0 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Trim13Q9CYB0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim13Q9CYB0 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim13Q9CYB0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim13Q9CYB0 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Trim13Q9CYB0 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim13Q9CYB0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim13Q9CYB0 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim13Q9CYB0 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms