Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Ssu72Q9CY97 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Ssu72Q9CY97 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Ssu72Q9CY97 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.21□□□□□ -0.13
Ssu72Q9CY97 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.21□□□□□ -0.13
Ssu72Q9CY97 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssu72Q9CY97 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssu72Q9CY97 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssu72Q9CY97 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssu72Q9CY97 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssu72Q9CY97 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.21□□□□□ -0.13
Ssu72Q9CY97 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssu72Q9CY97 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Ssu72Q9CY97 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssu72Q9CY97 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ssu72Q9CY97 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Ssu72Q9CY97 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ssu72Q9CY97 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ssu72Q9CY97 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ssu72Q9CY97 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ssu72Q9CY97 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Gm6376-201ENSMUST00000209407 580 ntBASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 AV026068-213ENSMUST00000223675 1171 ntBASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Birc2-201ENSMUST00000054878 378 ntBASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Gm10154-201ENSMUST00000084445 354 ntBASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Ssu72Q9CY97 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssu72Q9CY97 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms