Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim11Q99PQ2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim11Q99PQ2 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim11Q99PQ2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Trim11Q99PQ2 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim11Q99PQ2 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim11Q99PQ2 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim11Q99PQ2 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trim11Q99PQ2 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Trim11Q99PQ2 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim11Q99PQ2 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.3■□□□□ 0.2
Trim11Q99PQ2 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
Trim11Q99PQ2 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.3■□□□□ 0.2
Trim11Q99PQ2 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim11Q99PQ2 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim11Q99PQ2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim11Q99PQ2 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim11Q99PQ2 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim11Q99PQ2 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim11Q99PQ2 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim11Q99PQ2 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim11Q99PQ2 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim11Q99PQ2 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim11Q99PQ2 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim11Q99PQ2 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim11Q99PQ2 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim11Q99PQ2 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Gm5264-201ENSMUST00000190584 848 ntBASIC16.29■□□□□ 0.2
Trim11Q99PQ2 AW822252-206ENSMUST00000208904 237 ntBASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trim11Q99PQ2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim11Q99PQ2 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.28■□□□□ 0.2
Trim11Q99PQ2 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim11Q99PQ2 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim11Q99PQ2 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim11Q99PQ2 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim11Q99PQ2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim11Q99PQ2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim11Q99PQ2 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim11Q99PQ2 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim11Q99PQ2 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim11Q99PQ2 Gm2810-201ENSMUST00000118681 990 ntBASIC16.28■□□□□ 0.2
Trim11Q99PQ2 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.28■□□□□ 0.2
Trim11Q99PQ2 Gm6443-201ENSMUST00000203599 874 ntBASIC16.28■□□□□ 0.2
Trim11Q99PQ2 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.28■□□□□ 0.2
Trim11Q99PQ2 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim11Q99PQ2 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trim11Q99PQ2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim11Q99PQ2 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim11Q99PQ2 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trim11Q99PQ2 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.28■□□□□ 0.2
Trim11Q99PQ2 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.28■□□□□ 0.2
Trim11Q99PQ2 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim11Q99PQ2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim11Q99PQ2 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim11Q99PQ2 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim11Q99PQ2 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim11Q99PQ2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim11Q99PQ2 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim11Q99PQ2 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim11Q99PQ2 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim11Q99PQ2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim11Q99PQ2 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim11Q99PQ2 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim11Q99PQ2 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim11Q99PQ2 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim11Q99PQ2 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim11Q99PQ2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim11Q99PQ2 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.27■□□□□ 0.2
Trim11Q99PQ2 Gm8000-201ENSMUST00000188378 592 ntBASIC16.27■□□□□ 0.2
Trim11Q99PQ2 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.27■□□□□ 0.2
Trim11Q99PQ2 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.27■□□□□ 0.2
Trim11Q99PQ2 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms