Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm44297-201ENSMUST00000198304 141 ntBASIC14.22□□□□□ -0.13
Trim33Q99PP7 Gm44346-201ENSMUST00000198851 141 ntBASIC14.22□□□□□ -0.13
Trim33Q99PP7 Gm43125-201ENSMUST00000201724 730 ntBASIC14.22□□□□□ -0.13
Trim33Q99PP7 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Gm13615-201ENSMUST00000120242 1612 ntBASIC14.22□□□□□ -0.13
Trim33Q99PP7 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim33Q99PP7 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim33Q99PP7 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim33Q99PP7 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim33Q99PP7 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim33Q99PP7 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim33Q99PP7 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim33Q99PP7 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim33Q99PP7 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim33Q99PP7 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim33Q99PP7 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.21□□□□□ -0.13
Trim33Q99PP7 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim33Q99PP7 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim33Q99PP7 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim33Q99PP7 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim33Q99PP7 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim33Q99PP7 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim33Q99PP7 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.21□□□□□ -0.13
Trim33Q99PP7 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.21□□□□□ -0.13
Trim33Q99PP7 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim33Q99PP7 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim33Q99PP7 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim33Q99PP7 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim33Q99PP7 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trim33Q99PP7 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trim33Q99PP7 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trim33Q99PP7 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim33Q99PP7 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim33Q99PP7 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim33Q99PP7 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim33Q99PP7 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim33Q99PP7 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trim33Q99PP7 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim33Q99PP7 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim33Q99PP7 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim33Q99PP7 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim33Q99PP7 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trim33Q99PP7 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trim33Q99PP7 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim33Q99PP7 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.2□□□□□ -0.14
Trim33Q99PP7 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Trim33Q99PP7 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim33Q99PP7 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Gm9182-201ENSMUST00000217829 639 ntBASIC14.2□□□□□ -0.14
Trim33Q99PP7 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms