Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh15Q99PJ1 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh15Q99PJ1 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdh15Q99PJ1 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh15Q99PJ1 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh15Q99PJ1 Gm4986-201ENSMUST00000119731 549 ntBASIC15.84■□□□□ 0.13
Pcdh15Q99PJ1 Gm11591-201ENSMUST00000120063 702 ntBASIC15.84■□□□□ 0.13
Pcdh15Q99PJ1 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh15Q99PJ1 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Pcdh15Q99PJ1 Gm20482-202ENSMUST00000174729 825 ntBASIC15.84■□□□□ 0.13
Pcdh15Q99PJ1 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh15Q99PJ1 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh15Q99PJ1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh15Q99PJ1 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Pcdh15Q99PJ1 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
Pcdh15Q99PJ1 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.83■□□□□ 0.13
Pcdh15Q99PJ1 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Pcdh15Q99PJ1 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdh15Q99PJ1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdh15Q99PJ1 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdh15Q99PJ1 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh15Q99PJ1 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh15Q99PJ1 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh15Q99PJ1 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Pcdh15Q99PJ1 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC15.83■□□□□ 0.12
Pcdh15Q99PJ1 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh15Q99PJ1 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.83■□□□□ 0.12
Pcdh15Q99PJ1 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh15Q99PJ1 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Pcdh15Q99PJ1 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh15Q99PJ1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh15Q99PJ1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh15Q99PJ1 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.83■□□□□ 0.12
Pcdh15Q99PJ1 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.83■□□□□ 0.12
Pcdh15Q99PJ1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh15Q99PJ1 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh15Q99PJ1 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.83■□□□□ 0.12
Pcdh15Q99PJ1 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh15Q99PJ1 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC15.83■□□□□ 0.12
Pcdh15Q99PJ1 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh15Q99PJ1 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh15Q99PJ1 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh15Q99PJ1 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh15Q99PJ1 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh15Q99PJ1 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh15Q99PJ1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdh15Q99PJ1 Gm7809-201ENSMUST00000153199 742 ntBASIC15.82■□□□□ 0.12
Pcdh15Q99PJ1 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdh15Q99PJ1 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdh15Q99PJ1 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh15Q99PJ1 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.82■□□□□ 0.12
Pcdh15Q99PJ1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh15Q99PJ1 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh15Q99PJ1 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdh15Q99PJ1 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh15Q99PJ1 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.82■□□□□ 0.12
Pcdh15Q99PJ1 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Pcdh15Q99PJ1 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh15Q99PJ1 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh15Q99PJ1 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh15Q99PJ1 Gm16479-201ENSMUST00000121706 932 ntBASIC15.82■□□□□ 0.12
Pcdh15Q99PJ1 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh15Q99PJ1 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh15Q99PJ1 Gm16505-201ENSMUST00000179981 232 ntBASIC15.82■□□□□ 0.12
Pcdh15Q99PJ1 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdh15Q99PJ1 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdh15Q99PJ1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh15Q99PJ1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh15Q99PJ1 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh15Q99PJ1 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh15Q99PJ1 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh15Q99PJ1 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh15Q99PJ1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Pcdh15Q99PJ1 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh15Q99PJ1 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Pcdh15Q99PJ1 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh15Q99PJ1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh15Q99PJ1 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh15Q99PJ1 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh15Q99PJ1 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdh15Q99PJ1 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh15Q99PJ1 Gm43138-201ENSMUST00000199123 708 ntBASIC15.81■□□□□ 0.12
Pcdh15Q99PJ1 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdh15Q99PJ1 Gm17330-201ENSMUST00000221047 165 ntBASIC15.81■□□□□ 0.12
Pcdh15Q99PJ1 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh15Q99PJ1 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh15Q99PJ1 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh15Q99PJ1 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC15.81■□□□□ 0.12
Pcdh15Q99PJ1 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.81■□□□□ 0.12
Pcdh15Q99PJ1 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdh15Q99PJ1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
Pcdh15Q99PJ1 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh15Q99PJ1 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdh15Q99PJ1 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh15Q99PJ1 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh15Q99PJ1 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh15Q99PJ1 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh15Q99PJ1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Pcdh15Q99PJ1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms