Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Mir5120-201ENSMUST00000175020 78 ntBASIC14.28□□□□□ -0.12
Cdh23Q99PF4 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Gm18556-201ENSMUST00000219748 1031 ntBASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh23Q99PF4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Cdh23Q99PF4 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdh23Q99PF4 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cdh23Q99PF4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdh23Q99PF4 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdh23Q99PF4 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdh23Q99PF4 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdh23Q99PF4 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.27□□□□□ -0.12
Cdh23Q99PF4 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.27□□□□□ -0.12
Cdh23Q99PF4 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdh23Q99PF4 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdh23Q99PF4 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Cdh23Q99PF4 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdh23Q99PF4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdh23Q99PF4 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.27□□□□□ -0.13
Cdh23Q99PF4 Gm25732-201ENSMUST00000175168 60 ntBASIC14.27□□□□□ -0.13
Cdh23Q99PF4 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cdh23Q99PF4 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.27□□□□□ -0.13
Cdh23Q99PF4 Gm8959-201ENSMUST00000213150 571 ntBASIC14.27□□□□□ -0.13
Cdh23Q99PF4 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cdh23Q99PF4 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cdh23Q99PF4 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cdh23Q99PF4 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdh23Q99PF4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdh23Q99PF4 Gm12241-201ENSMUST00000118330 726 ntBASIC14.26□□□□□ -0.13
Cdh23Q99PF4 Gm13369-201ENSMUST00000119442 987 ntBASIC14.26□□□□□ -0.13
Cdh23Q99PF4 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC14.26□□□□□ -0.13
Cdh23Q99PF4 Gm7046-201ENSMUST00000221351 977 ntBASIC14.26□□□□□ -0.13
Cdh23Q99PF4 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cdh23Q99PF4 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh23Q99PF4 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh23Q99PF4 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh23Q99PF4 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh23Q99PF4 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh23Q99PF4 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh23Q99PF4 Gm4909-201ENSMUST00000118749 794 ntBASIC14.26□□□□□ -0.13
Cdh23Q99PF4 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh23Q99PF4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cdh23Q99PF4 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.26□□□□□ -0.13
Cdh23Q99PF4 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh23Q99PF4 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh23Q99PF4 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh23Q99PF4 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh23Q99PF4 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh23Q99PF4 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Cdh23Q99PF4 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.26□□□□□ -0.13
Cdh23Q99PF4 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh23Q99PF4 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.26□□□□□ -0.13
Cdh23Q99PF4 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cdh23Q99PF4 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh23Q99PF4 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh23Q99PF4 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh23Q99PF4 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh23Q99PF4 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh23Q99PF4 Gm8566-201ENSMUST00000120174 465 ntBASIC14.25□□□□□ -0.13
Cdh23Q99PF4 Gm12134-201ENSMUST00000122109 520 ntBASIC14.25□□□□□ -0.13
Cdh23Q99PF4 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.25□□□□□ -0.13
Cdh23Q99PF4 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh23Q99PF4 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh23Q99PF4 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh23Q99PF4 Gm15371-201ENSMUST00000117057 784 ntBASIC14.25□□□□□ -0.13
Cdh23Q99PF4 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.25□□□□□ -0.13
Cdh23Q99PF4 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.25□□□□□ -0.13
Cdh23Q99PF4 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh23Q99PF4 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.25□□□□□ -0.13
Cdh23Q99PF4 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh23Q99PF4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh23Q99PF4 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh23Q99PF4 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh23Q99PF4 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh23Q99PF4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cdh23Q99PF4 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh23Q99PF4 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms