Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tlr3Q99MB1 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Tlr3Q99MB1 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Tlr3Q99MB1 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.36■□□□□ 0.05
Tlr3Q99MB1 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tlr3Q99MB1 Gm10253-201ENSMUST00000194270 940 ntBASIC15.36■□□□□ 0.05
Tlr3Q99MB1 Gm18049-201ENSMUST00000208909 581 ntBASIC15.36■□□□□ 0.05
Tlr3Q99MB1 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tlr3Q99MB1 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.36■□□□□ 0.05
Tlr3Q99MB1 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tlr3Q99MB1 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tlr3Q99MB1 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tlr3Q99MB1 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Tlr3Q99MB1 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tlr3Q99MB1 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Tlr3Q99MB1 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tlr3Q99MB1 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Tlr3Q99MB1 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tlr3Q99MB1 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Tlr3Q99MB1 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tlr3Q99MB1 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Tlr3Q99MB1 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Tlr3Q99MB1 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Gm9824-201ENSMUST00000178707 561 ntBASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Gm29310-201ENSMUST00000185468 696 ntBASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Gm21825-201ENSMUST00000185728 696 ntBASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Gm29109-201ENSMUST00000185895 696 ntBASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Gm21896-201ENSMUST00000186520 696 ntBASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Gm21873-201ENSMUST00000186728 696 ntBASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Gm21794-201ENSMUST00000187056 696 ntBASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Gm21880-201ENSMUST00000187275 696 ntBASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Gm21826-201ENSMUST00000187451 696 ntBASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Gm21198-201ENSMUST00000188393 696 ntBASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Gm21749-201ENSMUST00000189343 696 ntBASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Gm21901-201ENSMUST00000189568 696 ntBASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Gm29424-201ENSMUST00000189716 696 ntBASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Gm28599-201ENSMUST00000189838 694 ntBASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Gm21867-201ENSMUST00000189917 696 ntBASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Gm29269-201ENSMUST00000190087 696 ntBASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Gm21722-201ENSMUST00000190153 696 ntBASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Gm28423-201ENSMUST00000190701 696 ntBASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Gm21899-201ENSMUST00000190745 696 ntBASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Gm21910-201ENSMUST00000191163 696 ntBASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Gm21849-201ENSMUST00000191571 696 ntBASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Gm28678-201ENSMUST00000191593 696 ntBASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Gm20910-201ENSMUST00000193268 696 ntBASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Gm21871-201ENSMUST00000194621 696 ntBASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tlr3Q99MB1 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.34■□□□□ 0.05
Tlr3Q99MB1 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Gm13015-201ENSMUST00000118674 204 ntBASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms