Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf3Q99LI7 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Gm12260-201ENSMUST00000122447 411 ntBASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Gm27920-201ENSMUST00000183953 96 ntBASIC13.84□□□□□ -0.19
Cstf3Q99LI7 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf3Q99LI7 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cstf3Q99LI7 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Cstf3Q99LI7 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf3Q99LI7 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cstf3Q99LI7 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cstf3Q99LI7 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf3Q99LI7 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf3Q99LI7 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.83□□□□□ -0.2
Cstf3Q99LI7 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf3Q99LI7 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cstf3Q99LI7 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf3Q99LI7 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
Cstf3Q99LI7 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.83□□□□□ -0.2
Cstf3Q99LI7 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf3Q99LI7 Gm44771-201ENSMUST00000206975 626 ntBASIC13.83□□□□□ -0.2
Cstf3Q99LI7 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf3Q99LI7 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf3Q99LI7 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf3Q99LI7 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf3Q99LI7 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf3Q99LI7 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf3Q99LI7 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf3Q99LI7 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf3Q99LI7 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf3Q99LI7 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf3Q99LI7 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf3Q99LI7 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf3Q99LI7 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf3Q99LI7 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf3Q99LI7 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cstf3Q99LI7 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf3Q99LI7 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf3Q99LI7 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms