Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Gm9385-201ENSMUST00000117563 472 ntBASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Mir1895-201ENSMUST00000122615 79 ntBASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Gm27494-201ENSMUST00000184735 189 ntBASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vmp1Q99KU0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Gm23935-201ENSMUST00000102303 57 ntBASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Gm24270-201ENSMUST00000102326 57 ntBASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Gm24245-201ENSMUST00000157318 57 ntBASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Rpph1-201ENSMUST00000175096 319 ntBASIC13.81□□□□□ -0.2
Vmp1Q99KU0 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vmp1Q99KU0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vmp1Q99KU0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vmp1Q99KU0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vmp1Q99KU0 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.8□□□□□ -0.2
Vmp1Q99KU0 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vmp1Q99KU0 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.8□□□□□ -0.2
Vmp1Q99KU0 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.8□□□□□ -0.2
Vmp1Q99KU0 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.8□□□□□ -0.2
Vmp1Q99KU0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vmp1Q99KU0 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vmp1Q99KU0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Vmp1Q99KU0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Vmp1Q99KU0 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.8□□□□□ -0.2
Vmp1Q99KU0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.8□□□□□ -0.2
Vmp1Q99KU0 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.8□□□□□ -0.2
Vmp1Q99KU0 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.8□□□□□ -0.2
Vmp1Q99KU0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vmp1Q99KU0 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vmp1Q99KU0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Vmp1Q99KU0 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vmp1Q99KU0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vmp1Q99KU0 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Vmp1Q99KU0 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms