Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk9Q99J95 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.42□□□□□ -0.1
Cdk9Q99J95 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.42□□□□□ -0.1
Cdk9Q99J95 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.42□□□□□ -0.1
Cdk9Q99J95 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.42□□□□□ -0.1
Cdk9Q99J95 Mzt1-203ENSMUST00000227948 952 ntBASIC14.42□□□□□ -0.1
Cdk9Q99J95 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk9Q99J95 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Gm11452-201ENSMUST00000122376 690 ntBASIC14.41□□□□□ -0.1
Cdk9Q99J95 Gm11780-201ENSMUST00000136880 516 ntBASIC14.41□□□□□ -0.1
Cdk9Q99J95 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.41□□□□□ -0.1
Cdk9Q99J95 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.41□□□□□ -0.1
Cdk9Q99J95 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Rps4l-201ENSMUST00000071745 943 ntBASIC14.41□□□□□ -0.1
Cdk9Q99J95 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cdk9Q99J95 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk9Q99J95 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.4□□□□□ -0.1
Cdk9Q99J95 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk9Q99J95 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.4□□□□□ -0.1
Cdk9Q99J95 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.4□□□□□ -0.1
Cdk9Q99J95 Gm44357-201ENSMUST00000195897 142 ntBASIC14.4□□□□□ -0.1
Cdk9Q99J95 Gm19658-201ENSMUST00000196231 138 ntBASIC14.4□□□□□ -0.1
Cdk9Q99J95 Gm44367-201ENSMUST00000196836 138 ntBASIC14.4□□□□□ -0.1
Cdk9Q99J95 Gm44350-201ENSMUST00000197197 138 ntBASIC14.4□□□□□ -0.1
Cdk9Q99J95 Gm44390-201ENSMUST00000197533 144 ntBASIC14.4□□□□□ -0.1
Cdk9Q99J95 Gm44313-201ENSMUST00000198018 138 ntBASIC14.4□□□□□ -0.1
Cdk9Q99J95 Gm44486-201ENSMUST00000198508 138 ntBASIC14.4□□□□□ -0.1
Cdk9Q99J95 Gm44314-201ENSMUST00000199263 138 ntBASIC14.4□□□□□ -0.1
Cdk9Q99J95 Gm44394-201ENSMUST00000199558 138 ntBASIC14.4□□□□□ -0.1
Cdk9Q99J95 Gm44484-201ENSMUST00000199873 138 ntBASIC14.4□□□□□ -0.1
Cdk9Q99J95 Gm44466-201ENSMUST00000200264 138 ntBASIC14.4□□□□□ -0.1
Cdk9Q99J95 Gm44359-201ENSMUST00000200671 138 ntBASIC14.4□□□□□ -0.1
Cdk9Q99J95 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.4□□□□□ -0.1
Cdk9Q99J95 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.4□□□□□ -0.1
Cdk9Q99J95 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms