Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb2Q91Y00 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Gm13323-201ENSMUST00000120245 1151 ntBASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Gm14767-201ENSMUST00000121559 586 ntBASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Gm27631-201ENSMUST00000184163 466 ntBASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb2Q91Y00 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Mir7023-201ENSMUST00000185093 64 ntBASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 AA619741-201ENSMUST00000195095 646 ntBASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Gm45453-201ENSMUST00000211758 853 ntBASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 AC073947.1-201ENSMUST00000216991 649 ntBASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms