Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhga3Q91XY5 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhga3Q91XY5 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhga3Q91XY5 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
Pcdhga3Q91XY5 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhga3Q91XY5 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
Pcdhga3Q91XY5 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhga3Q91XY5 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhga3Q91XY5 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhga3Q91XY5 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Pcdhga3Q91XY5 Rubie-203ENSMUST00000227803 2430 ntBASIC12.77□□□□□ -0.37
Pcdhga3Q91XY5 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhga3Q91XY5 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhga3Q91XY5 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga3Q91XY5 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.77□□□□□ -0.37
Pcdhga3Q91XY5 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga3Q91XY5 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga3Q91XY5 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga3Q91XY5 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pcdhga3Q91XY5 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pcdhga3Q91XY5 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga3Q91XY5 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga3Q91XY5 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga3Q91XY5 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga3Q91XY5 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga3Q91XY5 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhga3Q91XY5 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga3Q91XY5 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga3Q91XY5 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga3Q91XY5 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga3Q91XY5 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga3Q91XY5 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Pcdhga3Q91XY5 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.77□□□□□ -0.37
Pcdhga3Q91XY5 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga3Q91XY5 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga3Q91XY5 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga3Q91XY5 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga3Q91XY5 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga3Q91XY5 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms