Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm12644-201ENSMUST00000119935 606 ntBASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Gm9682-201ENSMUST00000197505 556 ntBASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Rpa1Q8VEE4 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa1Q8VEE4 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa1Q8VEE4 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms