Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Rprd1aQ8VDS4 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.74□□□□□ -0.05
Rprd1aQ8VDS4 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rprd1aQ8VDS4 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.74□□□□□ -0.05
Rprd1aQ8VDS4 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rprd1aQ8VDS4 Gm10275-202ENSMUST00000168697 495 ntBASIC14.74□□□□□ -0.05
Rprd1aQ8VDS4 Gm25144-201ENSMUST00000179561 110 ntBASIC14.74□□□□□ -0.05
Rprd1aQ8VDS4 Gm25352-201ENSMUST00000179815 110 ntBASIC14.74□□□□□ -0.05
Rprd1aQ8VDS4 Gm17837-201ENSMUST00000186435 985 ntBASIC14.74□□□□□ -0.05
Rprd1aQ8VDS4 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.74□□□□□ -0.05
Rprd1aQ8VDS4 Gm10576-201ENSMUST00000191927 825 ntBASIC14.74□□□□□ -0.05
Rprd1aQ8VDS4 Gm38294-201ENSMUST00000192831 381 ntBASIC14.74□□□□□ -0.05
Rprd1aQ8VDS4 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.74□□□□□ -0.05
Rprd1aQ8VDS4 Gm10275-201ENSMUST00000092620 635 ntBASIC14.74□□□□□ -0.05
Rprd1aQ8VDS4 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rprd1aQ8VDS4 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rprd1aQ8VDS4 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rprd1aQ8VDS4 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Rprd1aQ8VDS4 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.74□□□□□ -0.05
Rprd1aQ8VDS4 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Rprd1aQ8VDS4 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rprd1aQ8VDS4 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rprd1aQ8VDS4 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rprd1aQ8VDS4 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Gm24543-201ENSMUST00000103867 82 ntBASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rprd1aQ8VDS4 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 Gm27631-201ENSMUST00000184163 466 ntBASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 Gm6888-201ENSMUST00000221983 706 ntBASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.72□□□□□ -0.05
Rprd1aQ8VDS4 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.71□□□□□ -0.05
Rprd1aQ8VDS4 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rprd1aQ8VDS4 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rprd1aQ8VDS4 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rprd1aQ8VDS4 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rprd1aQ8VDS4 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rprd1aQ8VDS4 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rprd1aQ8VDS4 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rprd1aQ8VDS4 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rprd1aQ8VDS4 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms