Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Gm9899-201ENSMUST00000065519 555 ntBASIC20.1■□□□□ 0.81
Cd109Q8R422 Gm9816-201ENSMUST00000122292 1414 ntBASIC20.09■□□□□ 0.81
Cd109Q8R422 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cd109Q8R422 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cd109Q8R422 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC20.09■□□□□ 0.81
Cd109Q8R422 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC20.09■□□□□ 0.81
Cd109Q8R422 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cd109Q8R422 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cd109Q8R422 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cd109Q8R422 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cd109Q8R422 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cd109Q8R422 Gm12485-201ENSMUST00000119641 291 ntBASIC20.09■□□□□ 0.81
Cd109Q8R422 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cd109Q8R422 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cd109Q8R422 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Cd109Q8R422 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cd109Q8R422 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cd109Q8R422 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC20.09■□□□□ 0.81
Cd109Q8R422 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cd109Q8R422 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cd109Q8R422 Gm9347-201ENSMUST00000211473 1607 ntBASIC20.08■□□□□ 0.81
Cd109Q8R422 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cd109Q8R422 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cd109Q8R422 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cd109Q8R422 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cd109Q8R422 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cd109Q8R422 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cd109Q8R422 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cd109Q8R422 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cd109Q8R422 Gm12928-201ENSMUST00000117115 573 ntBASIC20.08■□□□□ 0.8
Cd109Q8R422 Gm16425-201ENSMUST00000118143 3130 ntBASIC20.08■□□□□ 0.8
Cd109Q8R422 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cd109Q8R422 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cd109Q8R422 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cd109Q8R422 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cd109Q8R422 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cd109Q8R422 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC20.08■□□□□ 0.8
Cd109Q8R422 Gm37812-201ENSMUST00000195216 2475 ntBASIC20.08■□□□□ 0.8
Cd109Q8R422 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC20.08■□□□□ 0.8
Cd109Q8R422 Gm43630-201ENSMUST00000201550 776 ntBASIC20.08■□□□□ 0.8
Cd109Q8R422 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC20.08■□□□□ 0.8
Cd109Q8R422 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cd109Q8R422 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cd109Q8R422 AC166349.1-201ENSMUST00000220866 695 ntBASIC20.08■□□□□ 0.8
Cd109Q8R422 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cd109Q8R422 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cd109Q8R422 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cd109Q8R422 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
Cd109Q8R422 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cd109Q8R422 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cd109Q8R422 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cd109Q8R422 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cd109Q8R422 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cd109Q8R422 AC126549.2-201ENSMUST00000223997 1976 ntBASIC20.07■□□□□ 0.8
Cd109Q8R422 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cd109Q8R422 Gm44645-201ENSMUST00000205492 1653 ntBASIC20.07■□□□□ 0.8
Cd109Q8R422 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC20.07■□□□□ 0.8
Cd109Q8R422 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cd109Q8R422 AC131068.2-201ENSMUST00000226175 1453 ntBASIC20.07■□□□□ 0.8
Cd109Q8R422 Gm13859-201ENSMUST00000119936 1423 ntBASIC20.07■□□□□ 0.8
Cd109Q8R422 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cd109Q8R422 Mup-ps23-201ENSMUST00000118063 630 ntBASIC20.07■□□□□ 0.8
Cd109Q8R422 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC20.07■□□□□ 0.8
Cd109Q8R422 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cd109Q8R422 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC20.07■□□□□ 0.8
Cd109Q8R422 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC20.07■□□□□ 0.8
Cd109Q8R422 Gm6983-201ENSMUST00000214912 628 ntBASIC20.07■□□□□ 0.8
Cd109Q8R422 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cd109Q8R422 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cd109Q8R422 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cd109Q8R422 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Cd109Q8R422 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cd109Q8R422 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cd109Q8R422 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Cd109Q8R422 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC20.06■□□□□ 0.8
Cd109Q8R422 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Cd109Q8R422 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cd109Q8R422 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Cd109Q8R422 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cd109Q8R422 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Cd109Q8R422 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cd109Q8R422 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Cd109Q8R422 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Cd109Q8R422 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cd109Q8R422 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cd109Q8R422 Gm13226-201ENSMUST00000117838 404 ntBASIC20.06■□□□□ 0.8
Cd109Q8R422 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC20.06■□□□□ 0.8
Cd109Q8R422 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cd109Q8R422 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC20.06■□□□□ 0.8
Cd109Q8R422 Gm29741-201ENSMUST00000192667 421 ntBASIC20.06■□□□□ 0.8
Cd109Q8R422 Gm5276-201ENSMUST00000196683 1047 ntBASIC20.06■□□□□ 0.8
Cd109Q8R422 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC20.06■□□□□ 0.8
Cd109Q8R422 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC20.06■□□□□ 0.8
Cd109Q8R422 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cd109Q8R422 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cd109Q8R422 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cd109Q8R422 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cd109Q8R422 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cd109Q8R422 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cd109Q8R422 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms