Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sf3a1Q8K4Z5 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sf3a1Q8K4Z5 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sf3a1Q8K4Z5 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sf3a1Q8K4Z5 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sf3a1Q8K4Z5 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Sf3a1Q8K4Z5 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sf3a1Q8K4Z5 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sf3a1Q8K4Z5 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sf3a1Q8K4Z5 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sf3a1Q8K4Z5 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sf3a1Q8K4Z5 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Sf3a1Q8K4Z5 Gm6222-201ENSMUST00000120787 396 ntBASIC17.52■□□□□ 0.4
Sf3a1Q8K4Z5 Gm9719-201ENSMUST00000162765 543 ntBASIC17.52■□□□□ 0.4
Sf3a1Q8K4Z5 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Sf3a1Q8K4Z5 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Sf3a1Q8K4Z5 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sf3a1Q8K4Z5 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sf3a1Q8K4Z5 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Sf3a1Q8K4Z5 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sf3a1Q8K4Z5 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sf3a1Q8K4Z5 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Sf3a1Q8K4Z5 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sf3a1Q8K4Z5 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Sf3a1Q8K4Z5 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sf3a1Q8K4Z5 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3a1Q8K4Z5 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3a1Q8K4Z5 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3a1Q8K4Z5 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3a1Q8K4Z5 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3a1Q8K4Z5 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3a1Q8K4Z5 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3a1Q8K4Z5 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3a1Q8K4Z5 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3a1Q8K4Z5 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3a1Q8K4Z5 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3a1Q8K4Z5 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3a1Q8K4Z5 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3a1Q8K4Z5 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3a1Q8K4Z5 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.51■□□□□ 0.39
Sf3a1Q8K4Z5 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.51■□□□□ 0.39
Sf3a1Q8K4Z5 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3a1Q8K4Z5 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.51■□□□□ 0.39
Sf3a1Q8K4Z5 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3a1Q8K4Z5 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.51■□□□□ 0.39
Sf3a1Q8K4Z5 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3a1Q8K4Z5 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3a1Q8K4Z5 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.51■□□□□ 0.39
Sf3a1Q8K4Z5 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3a1Q8K4Z5 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Sf3a1Q8K4Z5 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sf3a1Q8K4Z5 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Sf3a1Q8K4Z5 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sf3a1Q8K4Z5 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sf3a1Q8K4Z5 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sf3a1Q8K4Z5 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sf3a1Q8K4Z5 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sf3a1Q8K4Z5 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sf3a1Q8K4Z5 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sf3a1Q8K4Z5 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sf3a1Q8K4Z5 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.5■□□□□ 0.39
Sf3a1Q8K4Z5 Gm27631-201ENSMUST00000184163 466 ntBASIC17.5■□□□□ 0.39
Sf3a1Q8K4Z5 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.5■□□□□ 0.39
Sf3a1Q8K4Z5 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sf3a1Q8K4Z5 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.5■□□□□ 0.39
Sf3a1Q8K4Z5 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sf3a1Q8K4Z5 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sf3a1Q8K4Z5 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sf3a1Q8K4Z5 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Sf3a1Q8K4Z5 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sf3a1Q8K4Z5 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.5■□□□□ 0.39
Sf3a1Q8K4Z5 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sf3a1Q8K4Z5 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sf3a1Q8K4Z5 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Sf3a1Q8K4Z5 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sf3a1Q8K4Z5 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sf3a1Q8K4Z5 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sf3a1Q8K4Z5 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sf3a1Q8K4Z5 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sf3a1Q8K4Z5 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sf3a1Q8K4Z5 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sf3a1Q8K4Z5 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sf3a1Q8K4Z5 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sf3a1Q8K4Z5 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.49■□□□□ 0.39
Sf3a1Q8K4Z5 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Sf3a1Q8K4Z5 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.49■□□□□ 0.39
Sf3a1Q8K4Z5 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Sf3a1Q8K4Z5 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.49■□□□□ 0.39
Sf3a1Q8K4Z5 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.49■□□□□ 0.39
Sf3a1Q8K4Z5 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sf3a1Q8K4Z5 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Sf3a1Q8K4Z5 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sf3a1Q8K4Z5 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.49■□□□□ 0.39
Sf3a1Q8K4Z5 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sf3a1Q8K4Z5 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sf3a1Q8K4Z5 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sf3a1Q8K4Z5 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sf3a1Q8K4Z5 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3a1Q8K4Z5 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Sf3a1Q8K4Z5 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms