Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim5Q8CI51 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim5Q8CI51 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim5Q8CI51 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim5Q8CI51 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim5Q8CI51 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Pdlim5Q8CI51 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim5Q8CI51 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Gm6973-201ENSMUST00000117080 721 ntBASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Gm11543-201ENSMUST00000120758 370 ntBASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Gm12260-201ENSMUST00000122447 411 ntBASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.15□□□□□ -0.3
Pdlim5Q8CI51 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pdlim5Q8CI51 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pdlim5Q8CI51 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pdlim5Q8CI51 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pdlim5Q8CI51 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pdlim5Q8CI51 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Gm18206-201ENSMUST00000207027 926 ntBASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim5Q8CI51 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
Pdlim5Q8CI51 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim5Q8CI51 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms