Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28bQ8CEG5 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ccdc28bQ8CEG5 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ccdc28bQ8CEG5 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ccdc28bQ8CEG5 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 Gm33142-201ENSMUST00000193913 867 ntBASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc28bQ8CEG5 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 Gm11764-201ENSMUST00000120221 623 ntBASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 Gm13836-201ENSMUST00000121159 501 ntBASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 Gm18246-201ENSMUST00000221023 728 ntBASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28bQ8CEG5 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms