Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pabpn1Q8CCS6 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pabpn1Q8CCS6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pabpn1Q8CCS6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pabpn1Q8CCS6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pabpn1Q8CCS6 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC21.69■■□□□ 1.06
Pabpn1Q8CCS6 Gm2231-201ENSMUST00000125661 612 ntBASIC21.69■■□□□ 1.06
Pabpn1Q8CCS6 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
Pabpn1Q8CCS6 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
Pabpn1Q8CCS6 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pabpn1Q8CCS6 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pabpn1Q8CCS6 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pabpn1Q8CCS6 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pabpn1Q8CCS6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pabpn1Q8CCS6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pabpn1Q8CCS6 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pabpn1Q8CCS6 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC21.68■■□□□ 1.06
Pabpn1Q8CCS6 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Pabpn1Q8CCS6 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pabpn1Q8CCS6 Gm10434-201ENSMUST00000101158 471 ntBASIC21.68■■□□□ 1.06
Pabpn1Q8CCS6 Gm15131-201ENSMUST00000119124 595 ntBASIC21.68■■□□□ 1.06
Pabpn1Q8CCS6 Gm13665-201ENSMUST00000120830 528 ntBASIC21.68■■□□□ 1.06
Pabpn1Q8CCS6 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC21.68■■□□□ 1.06
Pabpn1Q8CCS6 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pabpn1Q8CCS6 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Pabpn1Q8CCS6 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pabpn1Q8CCS6 AC159196.2-201ENSMUST00000224082 1622 ntBASIC21.68■■□□□ 1.06
Pabpn1Q8CCS6 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
Pabpn1Q8CCS6 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pabpn1Q8CCS6 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pabpn1Q8CCS6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pabpn1Q8CCS6 Gm7292-201ENSMUST00000194706 2527 ntBASIC21.68■■□□□ 1.06
Pabpn1Q8CCS6 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC21.68■■□□□ 1.06
Pabpn1Q8CCS6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pabpn1Q8CCS6 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pabpn1Q8CCS6 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pabpn1Q8CCS6 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pabpn1Q8CCS6 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pabpn1Q8CCS6 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pabpn1Q8CCS6 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pabpn1Q8CCS6 Gm9347-201ENSMUST00000211473 1607 ntBASIC21.67■■□□□ 1.06
Pabpn1Q8CCS6 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC21.67■■□□□ 1.06
Pabpn1Q8CCS6 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pabpn1Q8CCS6 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pabpn1Q8CCS6 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC21.67■■□□□ 1.06
Pabpn1Q8CCS6 Gm25951-201ENSMUST00000175330 64 ntBASIC21.67■■□□□ 1.06
Pabpn1Q8CCS6 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC21.67■■□□□ 1.06
Pabpn1Q8CCS6 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC21.67■■□□□ 1.06
Pabpn1Q8CCS6 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC21.67■■□□□ 1.06
Pabpn1Q8CCS6 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC21.67■■□□□ 1.06
Pabpn1Q8CCS6 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pabpn1Q8CCS6 Gm18393-201ENSMUST00000208349 1131 ntBASIC21.67■■□□□ 1.06
Pabpn1Q8CCS6 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC21.67■■□□□ 1.06
Pabpn1Q8CCS6 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Pabpn1Q8CCS6 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pabpn1Q8CCS6 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Pabpn1Q8CCS6 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pabpn1Q8CCS6 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pabpn1Q8CCS6 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pabpn1Q8CCS6 AC139054.1-201ENSMUST00000226898 1598 ntBASIC21.66■■□□□ 1.06
Pabpn1Q8CCS6 CU062626.3-201ENSMUST00000225522 1411 ntBASIC21.66■■□□□ 1.06
Pabpn1Q8CCS6 Gm42473-201ENSMUST00000201056 2291 ntBASIC21.66■■□□□ 1.06
Pabpn1Q8CCS6 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pabpn1Q8CCS6 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pabpn1Q8CCS6 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC21.66■■□□□ 1.06
Pabpn1Q8CCS6 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC21.66■■□□□ 1.06
Pabpn1Q8CCS6 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
Pabpn1Q8CCS6 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pabpn1Q8CCS6 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pabpn1Q8CCS6 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pabpn1Q8CCS6 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pabpn1Q8CCS6 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pabpn1Q8CCS6 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pabpn1Q8CCS6 Gm26596-201ENSMUST00000180464 2655 ntBASIC21.65■■□□□ 1.06
Pabpn1Q8CCS6 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pabpn1Q8CCS6 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pabpn1Q8CCS6 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Pabpn1Q8CCS6 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pabpn1Q8CCS6 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pabpn1Q8CCS6 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC21.65■■□□□ 1.06
Pabpn1Q8CCS6 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Pabpn1Q8CCS6 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC21.65■■□□□ 1.06
Pabpn1Q8CCS6 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pabpn1Q8CCS6 AC134254.1-201ENSMUST00000221362 167 ntBASIC21.65■■□□□ 1.06
Pabpn1Q8CCS6 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pabpn1Q8CCS6 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Pabpn1Q8CCS6 Gm16372-201ENSMUST00000073088 450 ntBASIC21.65■■□□□ 1.06
Pabpn1Q8CCS6 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pabpn1Q8CCS6 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Pabpn1Q8CCS6 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pabpn1Q8CCS6 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pabpn1Q8CCS6 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pabpn1Q8CCS6 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC21.64■■□□□ 1.06
Pabpn1Q8CCS6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pabpn1Q8CCS6 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pabpn1Q8CCS6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC21.64■■□□□ 1.05
Pabpn1Q8CCS6 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pabpn1Q8CCS6 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
Pabpn1Q8CCS6 Gm13316-201ENSMUST00000140537 691 ntBASIC21.64■■□□□ 1.05
Pabpn1Q8CCS6 Gm29608-201ENSMUST00000190444 463 ntBASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms