Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Gm13015-201ENSMUST00000118674 204 ntBASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Gm25948-201ENSMUST00000175334 112 ntBASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Gm9824-201ENSMUST00000178707 561 ntBASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Gm18049-201ENSMUST00000208909 581 ntBASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Gm9182-201ENSMUST00000217829 639 ntBASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Srrm4Q8BKA3 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Gm13616-201ENSMUST00000120600 222 ntBASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Gm37230-201ENSMUST00000194491 818 ntBASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Gm5779-201ENSMUST00000218467 910 ntBASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Srrm4Q8BKA3 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Srrm4Q8BKA3 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Srrm4Q8BKA3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.4□□□□□ -0.42
Srrm4Q8BKA3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Srrm4Q8BKA3 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Srrm4Q8BKA3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Srrm4Q8BKA3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Srrm4Q8BKA3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Srrm4Q8BKA3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Srrm4Q8BKA3 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Srrm4Q8BKA3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Srrm4Q8BKA3 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Srrm4Q8BKA3 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Srrm4Q8BKA3 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.4□□□□□ -0.42
Srrm4Q8BKA3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Srrm4Q8BKA3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms