Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Samm50Q8BGH2 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Samm50Q8BGH2 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Samm50Q8BGH2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Samm50Q8BGH2 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Samm50Q8BGH2 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Samm50Q8BGH2 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Samm50Q8BGH2 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Samm50Q8BGH2 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Samm50Q8BGH2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Samm50Q8BGH2 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Samm50Q8BGH2 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Samm50Q8BGH2 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Samm50Q8BGH2 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Samm50Q8BGH2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Samm50Q8BGH2 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16.78■□□□□ 0.28
Samm50Q8BGH2 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Samm50Q8BGH2 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Samm50Q8BGH2 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Samm50Q8BGH2 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Samm50Q8BGH2 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Samm50Q8BGH2 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Samm50Q8BGH2 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Samm50Q8BGH2 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.78■□□□□ 0.28
Samm50Q8BGH2 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Samm50Q8BGH2 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Samm50Q8BGH2 Gm11745-201ENSMUST00000121669 448 ntBASIC16.78■□□□□ 0.28
Samm50Q8BGH2 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.78■□□□□ 0.28
Samm50Q8BGH2 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.78■□□□□ 0.28
Samm50Q8BGH2 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Samm50Q8BGH2 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Samm50Q8BGH2 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Samm50Q8BGH2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.78■□□□□ 0.28
Samm50Q8BGH2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.78■□□□□ 0.28
Samm50Q8BGH2 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Samm50Q8BGH2 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Samm50Q8BGH2 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Samm50Q8BGH2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Samm50Q8BGH2 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Samm50Q8BGH2 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Samm50Q8BGH2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Samm50Q8BGH2 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.78■□□□□ 0.28
Samm50Q8BGH2 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.78■□□□□ 0.28
Samm50Q8BGH2 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Samm50Q8BGH2 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Samm50Q8BGH2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Samm50Q8BGH2 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Samm50Q8BGH2 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Samm50Q8BGH2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Samm50Q8BGH2 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Samm50Q8BGH2 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Samm50Q8BGH2 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Samm50Q8BGH2 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Samm50Q8BGH2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Samm50Q8BGH2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Samm50Q8BGH2 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Samm50Q8BGH2 Rprl2-201ENSMUST00000157150 290 ntBASIC16.77■□□□□ 0.28
Samm50Q8BGH2 Gm20553-201ENSMUST00000204205 844 ntBASIC16.77■□□□□ 0.28
Samm50Q8BGH2 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Samm50Q8BGH2 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.77■□□□□ 0.28
Samm50Q8BGH2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Samm50Q8BGH2 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Samm50Q8BGH2 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Samm50Q8BGH2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Samm50Q8BGH2 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Samm50Q8BGH2 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Samm50Q8BGH2 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms