Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp6nlQ80XC3 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Usp6nlQ80XC3 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Usp6nlQ80XC3 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.77■□□□□ 0.12
Usp6nlQ80XC3 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC15.77■□□□□ 0.12
Usp6nlQ80XC3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp6nlQ80XC3 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp6nlQ80XC3 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.77■□□□□ 0.12
Usp6nlQ80XC3 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Usp6nlQ80XC3 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.77■□□□□ 0.12
Usp6nlQ80XC3 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Usp6nlQ80XC3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Usp6nlQ80XC3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Usp6nlQ80XC3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Usp6nlQ80XC3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Usp6nlQ80XC3 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Usp6nlQ80XC3 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Usp6nlQ80XC3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Usp6nlQ80XC3 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp6nlQ80XC3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Usp6nlQ80XC3 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp6nlQ80XC3 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Usp6nlQ80XC3 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp6nlQ80XC3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp6nlQ80XC3 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp6nlQ80XC3 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp6nlQ80XC3 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC15.76■□□□□ 0.11
Usp6nlQ80XC3 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Usp6nlQ80XC3 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Usp6nlQ80XC3 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.76■□□□□ 0.11
Usp6nlQ80XC3 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.76■□□□□ 0.11
Usp6nlQ80XC3 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.76■□□□□ 0.11
Usp6nlQ80XC3 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Usp6nlQ80XC3 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp6nlQ80XC3 Gm9899-201ENSMUST00000065519 555 ntBASIC15.76■□□□□ 0.11
Usp6nlQ80XC3 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp6nlQ80XC3 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp6nlQ80XC3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Usp6nlQ80XC3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Usp6nlQ80XC3 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp6nlQ80XC3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp6nlQ80XC3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp6nlQ80XC3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp6nlQ80XC3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Usp6nlQ80XC3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Usp6nlQ80XC3 Gm42690-201ENSMUST00000197921 1836 ntBASIC15.75■□□□□ 0.11
Usp6nlQ80XC3 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Usp6nlQ80XC3 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Usp6nlQ80XC3 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Usp6nlQ80XC3 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Usp6nlQ80XC3 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Usp6nlQ80XC3 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.75■□□□□ 0.11
Usp6nlQ80XC3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Usp6nlQ80XC3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Usp6nlQ80XC3 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Usp6nlQ80XC3 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Usp6nlQ80XC3 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Usp6nlQ80XC3 Gm17795-201ENSMUST00000214505 757 ntBASIC15.75■□□□□ 0.11
Usp6nlQ80XC3 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Usp6nlQ80XC3 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Usp6nlQ80XC3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Usp6nlQ80XC3 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Usp6nlQ80XC3 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Usp6nlQ80XC3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Usp6nlQ80XC3 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Usp6nlQ80XC3 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Usp6nlQ80XC3 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Usp6nlQ80XC3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.74■□□□□ 0.11
Usp6nlQ80XC3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Usp6nlQ80XC3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Usp6nlQ80XC3 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Usp6nlQ80XC3 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Usp6nlQ80XC3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Usp6nlQ80XC3 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Usp6nlQ80XC3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Usp6nlQ80XC3 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.74■□□□□ 0.11
Usp6nlQ80XC3 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.74■□□□□ 0.11
Usp6nlQ80XC3 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Usp6nlQ80XC3 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Usp6nlQ80XC3 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Usp6nlQ80XC3 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Usp6nlQ80XC3 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Usp6nlQ80XC3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Usp6nlQ80XC3 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Usp6nlQ80XC3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.73■□□□□ 0.11
Usp6nlQ80XC3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp6nlQ80XC3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Usp6nlQ80XC3 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp6nlQ80XC3 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.73■□□□□ 0.11
Usp6nlQ80XC3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC15.73■□□□□ 0.11
Usp6nlQ80XC3 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.73■□□□□ 0.11
Usp6nlQ80XC3 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Usp6nlQ80XC3 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Usp6nlQ80XC3 AY702102-202ENSMUST00000194651 1173 ntBASIC15.73■□□□□ 0.11
Usp6nlQ80XC3 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.73■□□□□ 0.11
Usp6nlQ80XC3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.73■□□□□ 0.11
Usp6nlQ80XC3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Usp6nlQ80XC3 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp6nlQ80XC3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp6nlQ80XC3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms